Functional clusters

Information

  • Type InterPro
  • Description Purine permease, plant

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-6 5 CH_aar_203 3 3 0.00000357089
Acer truncatum chr13 5 CH_acertr_348 3 3 0.00000062622
Arabidopsis lyrata scaffold_6 5 CH_aly_365 3 3 0.00000869167
Arabidopsis lyrata scaffold_2 5 CH_aly_696 3 9 0.000728007
Arabidopsis lyrata scaffold_7 5 CH_aly_98 5 6 0.0000000000173751
Avicennia marina ScioBoG_3703_HRSCAF_3719 5 CH_ama_82 3 5 0.00000624243
Aquilegia oxysepala CHR06 5 CH_aox_114 4 5 0.0000000140778
Aquilegia oxysepala CHR06 5 CH_aox_48 5 5 0.00000000000135557
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 5 CH_arhy_147 6 6 9.58526e-17
Arabidopsis thaliana Chr1 5 CH_ath_314 3 4 0.00000654853
Arabidopsis thaliana Chr4 5 CH_ath_44 6 8 6.59635e-16
Amborella trichopoda AmTr_v1.0_scaffold00135 5 CH_atr_59 5 6 0.000000000000100373
Brassica carinata ChrC01 5 CH_bca_1125 3 3 0.0000211498
Brassica carinata ChrC08 5 CH_bca_1373 3 4 0.0000845609
Brassica carinata ChrB04 5 CH_bca_1374 3 4 0.0000845609
Brassica carinata ChrC07 5 CH_bca_407 4 4 0.0000000124332
Brassica carinata ChrB03 5 CH_bca_408 4 4 0.0000000124332
Brassica napus A08 5 CH_bna_152 5 5 0.00000000000309726
Brassica napus A01 5 CH_bna_831 3 3 0.0000135584
Brassica napus C01 5 CH_bna_832 3 3 0.0000135584
Brassica napus C05 5 CH_bna_833 3 3 0.0000135584
Brassica napus A06 5 CH_bna_982 3 4 0.0000542136
Brassica oleracea C6 5 CH_bol_190 4 5 0.0000000107222
Brassica oleracea C8 5 CH_bol_547 3 5 0.0000524674
Brassica rapa A08 5 CH_bra_47 5 5 0.00000000000167614
Beta vulgaris Scaffold_0014 5 CH_bvu_278 3 5 0.00000863306
Cannabis sativa NC_044378.1 5 CH_cansat_20 8 9 4.48351e-23
Capsicum annuum PGAv.1.6.scaffold257 5 CH_can_102 6 8 0.0000000000000121279
Corylus avellana 3 5 CH_cav_854 3 24 0.000995612
Citrus clementina scaffold_2 5 CH_ccl_351 3 3 0.000000565268
Ceratophyllum demersum 6 5 CH_cde_126 3 3 0.00000154391
Ceratophyllum demersum 4 5 CH_cde_29 4 4 0.000000000487788
Carpinus fangiana Cfa01 5 CH_cfa_133 4 4 0.000000000091233
Cardamine hirsuta Chr7 5 CH_chi_213 4 4 0.0000000202866
Cardamine hirsuta Chr4 5 CH_chi_81 6 6 0.0000000000000133785
Carya illinoinensis Chr07 5 CH_cil_391 3 3 0.000000691558
Citrullus lanatus CG_Chr03 5 CH_cla_136 3 3 0.000000991629
Carica papaya supercontig_77 5 CH_cpa_107 4 5 0.0000000306599
Carica papaya supercontig_36 5 CH_cpa_19 6 6 0.0000000000000021632
Carica papaya supercontig_14 5 CH_cpa_86 4 4 0.00000000613531
Capsella rubella scaffold_7 5 CH_cru_69 6 6 0.00000000000000182293
Cucumis sativus L. chr1 5 CH_csa_224 3 3 0.00000125433
Daucus carota DCARv2_Chr1 5 CH_dca_306 3 3 0.00000414906
Daucus carota DCARv2_Chr6 5 CH_dca_307 3 3 0.00000414906
Davidia involucrata GWHABJS00000020 5 CH_din_350 3 4 0.00000330109
Durio zibethinus NW_019168015.1 5 CH_dzi_138 5 12 0.00000000268564
Durio zibethinus NW_019167949.1 5 CH_dzi_466 3 6 0.000210842
Durio zibethinus NW_019167982.1 5 CH_dzi_47 8 19 3.38556e-17
Erigeron canadensis Conyza_canadensis_scaffold:7 5 CH_eca_320 3 3 0.000000664475
Eucalyptus grandis Chr04 5 CH_egr_121 8 8 3.24453e-23
Eucalyptus grandis Chr06 5 CH_egr_545 4 4 0.0000000018406
Eutrema salsugineum scaffold_1 5 CH_esa_75 5 5 0.00000000000216131
Fragaria vesca Fvb3 5 CH_fve_173 4 4 0.00000000012881
Gossypium hirsutum D05 5 CH_ghi_674 3 3 0.00000530459
Glycine max Gm09 5 CH_gma_431 3 3 0.00000246353
Gossypium raimondii Chr09 5 CH_gra_353 3 3 0.00000663936
Gossypium raimondii Chr07 5 CH_gra_392 4 22 0.0000245533
Helianthus annuus HanXRQChr01 5 CH_han_851 3 8 0.0000701719
Lupinus albus Lalb_Chr11 5 CH_lal_465 3 4 0.000117922
Lupinus albus Lalb_Chr02 5 CH_lal_85 5 5 0.0000000000214544
Lotus japonicus chr1 5 CH_lja_96 4 4 0.000000000784392
Lonicera japonica GWHAAZE00000004 5 CH_lonja_444 5 33 0.000000140407
Lactuca sativa Lsat_1_v8_lg_1 5 CH_lsa_295 5 31 0.0000000177101
Lactuca sativa Lsat_1_v8_lg_1 5 CH_lsa_438 3 3 0.00000144258
Magnolia biondii Chr06 5 CH_mbi_18 10 11 4.13592e-29
Magnolia biondii Chr06 5 CH_mbi_305 4 5 0.0000000102809
Magnolia biondii Chr04 5 CH_mbi_610 3 3 0.00000470565
Malus domestica Chr10 5 CH_mdo_146 5 6 0.000000000000406432
Manihot esculenta Chromosome10 5 CH_mes_215 4 4 0.00000000093246
Olea europaea chr18 5 CH_oeu_277 3 9 0.0000301313
Oryza sativa ssp. japonica chr04 5 CH_osa_367 3 4 0.00000478521
Petunia axillaris Peaxi162Scf00139 5 CH_pax_164 4 5 0.0000000381956
Punica granatum NC_045130.1 5 CH_pgr_64 6 9 0.00000000000000771148
Prunus persica Pp04 5 CH_ppe_412 3 3 0.00000137729
Pisum sativum chr1LG6 5 CH_psa_291 3 4 0.00000137124
Papaver somniferum NC_039363.1 5 CH_pso_152 8 26 0.0000000000000509902
Papaver somniferum NC_039363.1 5 CH_pso_308 5 7 0.0000000011056
Papaver somniferum NC_039358.1 5 CH_pso_62 10 27 1.8893e-19
Quercus lobata 9 5 CH_qlo_1062 3 3 0.00000615756
Quercus lobata 4 5 CH_qlo_1067 5 59 0.00000687944
Quercus lobata 5 5 CH_qlo_261 7 13 4.35691e-16
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_645 3 3 0.000000393344
Rhododendron simsii chr07 5 CH_rsi_12 15 25 3.07645e-40
Striga asiatica scaffold5 5 CH_sas_14 4 4 0.0000000000924584
Salvia bowleyana GWHASIU00000003 5 CH_sbo_387 3 4 0.00000355163
Salvia bowleyana GWHASIU00000004 5 CH_sbo_467 4 48 0.0000389911
Sechium edule LG04 5 CH_sed_209 3 3 0.00000125974
Sequoiadendron giganteum chr1 5 CH_sgi_142 9 11 7.72567e-24
Sequoiadendron giganteum chr4 5 CH_sgi_383 6 8 0.0000000000000397689
Solanum lycopersicum SL4.0ch02 5 CH_sly_109 6 7 0.000000000000032467
Solanum lycopersicum SL4.0ch10 5 CH_sly_504 3 3 0.0000151153
Schrenkiella parvula ch1-1 5 CH_spa_178 3 3 0.00000758792
Schrenkiella parvula ch7-4 5 CH_spa_33 5 5 0.00000000000246997
Solanum pennellii Spenn-ch02 5 CH_spe_60 6 8 8.78119e-16
Solanum tuberosum ST4.03ch02 5 CH_stu_178 5 6 0.000000000016483
Solanum tuberosum ST4.03ch10 5 CH_stu_487 3 3 0.0000090602
Solanum tuberosum ST4.03ch06 5 CH_stu_488 3 3 0.0000090602
Selenicereus undatus Scaffold_10417 5 CH_sun_395 2 2 0.000726639
Theobroma cacao Chromosome_6 5 CH_tca_142 6 17 0.00000000000468243
Tripterygium wilfordii NC_052242.1 5 CH_twi_120 4 4 0.00000000251885
Tripterygium wilfordii NC_052242.1 5 CH_twi_264 3 3 0.00000531507
Utricularia gibba unitig_52 5 CH_ugi_83 3 3 0.00000367575
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_16 11 66 8.67259e-21
Vanilla planifolia CM028160.1 5 CH_vpl_10 8 11 2.73357e-20
Aethionema arabicum LG-6 6 CH_aar_203 3 3 0.00000357089
Acer truncatum chr13 6 CH_acertr_348 3 3 0.00000062622
Arabidopsis lyrata scaffold_6 6 CH_aly_365 3 3 0.00000869167
Arabidopsis lyrata scaffold_2 6 CH_aly_696 3 9 0.000728007
Arabidopsis lyrata scaffold_7 6 CH_aly_98 5 6 0.0000000000173751
Avicennia marina ScioBoG_3703_HRSCAF_3719 6 CH_ama_82 3 5 0.00000624243
Aquilegia oxysepala CHR06 6 CH_aox_114 4 5 0.0000000140778
Aquilegia oxysepala CHR06 6 CH_aox_48 5 5 0.00000000000135557
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 6 CH_arhy_147 6 6 9.58526e-17
Arabidopsis thaliana Chr1 6 CH_ath_314 3 4 0.00000654853
Arabidopsis thaliana Chr4 6 CH_ath_44 6 8 6.59635e-16
Amborella trichopoda AmTr_v1.0_scaffold00135 6 CH_atr_59 5 6 0.000000000000100373
Brassica carinata ChrC01 6 CH_bca_1125 3 3 0.0000211498
Brassica carinata ChrC08 6 CH_bca_1373 3 4 0.0000845609
Brassica carinata ChrB04 6 CH_bca_1374 3 4 0.0000845609
Brassica carinata ChrC07 6 CH_bca_407 4 4 0.0000000124332
Brassica carinata ChrB03 6 CH_bca_408 4 4 0.0000000124332
Brassica napus A08 6 CH_bna_152 5 5 0.00000000000309726
Brassica napus A01 6 CH_bna_831 3 3 0.0000135584
Brassica napus C01 6 CH_bna_832 3 3 0.0000135584
Brassica napus C05 6 CH_bna_833 3 3 0.0000135584
Brassica napus A06 6 CH_bna_982 3 4 0.0000542136
Brassica oleracea C6 6 CH_bol_190 4 5 0.0000000107222
Brassica oleracea C8 6 CH_bol_547 3 5 0.0000524674
Brassica rapa A08 6 CH_bra_47 5 5 0.00000000000167614
Beta vulgaris Scaffold_0014 6 CH_bvu_278 3 5 0.00000863306
Cannabis sativa NC_044378.1 6 CH_cansat_20 8 9 4.48351e-23
Capsicum annuum PGAv.1.6.scaffold257 6 CH_can_102 6 8 0.0000000000000121279
Corylus avellana 3 6 CH_cav_854 3 24 0.000995612
Citrus clementina scaffold_2 6 CH_ccl_351 3 3 0.000000565268
Ceratophyllum demersum 6 6 CH_cde_126 3 3 0.00000154391
Ceratophyllum demersum 4 6 CH_cde_29 4 4 0.000000000487788
Carpinus fangiana Cfa01 6 CH_cfa_133 4 4 0.000000000091233
Cardamine hirsuta Chr7 6 CH_chi_213 4 4 0.0000000202866
Cardamine hirsuta Chr4 6 CH_chi_81 6 6 0.0000000000000133785
Carya illinoinensis Chr07 6 CH_cil_391 3 3 0.000000691558
Citrullus lanatus CG_Chr03 6 CH_cla_136 3 3 0.000000991629
Cucumis melo chr12 6 CH_cme_197 3 3 0.000000801094
Carica papaya supercontig_77 6 CH_cpa_107 4 5 0.0000000306599
Carica papaya supercontig_36 6 CH_cpa_19 6 6 0.0000000000000021632
Carica papaya supercontig_14 6 CH_cpa_86 4 4 0.00000000613531
Capsella rubella scaffold_7 6 CH_cru_69 6 6 0.00000000000000182293
Cucumis sativus L. chr1 6 CH_csa_224 3 3 0.00000125433
Daucus carota DCARv2_Chr1 6 CH_dca_306 3 3 0.00000414906
Daucus carota DCARv2_Chr6 6 CH_dca_307 3 3 0.00000414906
Davidia involucrata GWHABJS00000020 6 CH_din_350 3 4 0.00000330109
Durio zibethinus NW_019168015.1 6 CH_dzi_138 5 12 0.00000000268564
Durio zibethinus NW_019167949.1 6 CH_dzi_466 3 6 0.000210842
Durio zibethinus NW_019167982.1 6 CH_dzi_47 8 19 3.38556e-17
Erigeron canadensis Conyza_canadensis_scaffold:7 6 CH_eca_320 3 3 0.000000664475
Eucalyptus grandis Chr04 6 CH_egr_121 8 8 3.24453e-23
Eucalyptus grandis Chr06 6 CH_egr_545 4 4 0.0000000018406
Eutrema salsugineum scaffold_1 6 CH_esa_75 5 5 0.00000000000216131
Fragaria vesca Fvb3 6 CH_fve_173 4 4 0.00000000012881
Gossypium hirsutum D05 6 CH_ghi_674 3 3 0.00000530459
Glycine max Gm09 6 CH_gma_431 3 3 0.00000246353
Gossypium raimondii Chr09 6 CH_gra_353 3 3 0.00000663936
Gossypium raimondii Chr07 6 CH_gra_392 4 22 0.0000245533
Helianthus annuus HanXRQChr01 6 CH_han_851 3 8 0.0000701719
Lupinus albus Lalb_Chr11 6 CH_lal_465 3 4 0.000117922
Lupinus albus Lalb_Chr02 6 CH_lal_85 5 5 0.0000000000214544
Lotus japonicus chr1 6 CH_lja_96 4 4 0.000000000784392
Lonicera japonica GWHAAZE00000004 6 CH_lonja_444 5 33 0.000000140407
Lactuca sativa Lsat_1_v8_lg_1 6 CH_lsa_295 5 31 0.0000000177101
Lactuca sativa Lsat_1_v8_lg_1 6 CH_lsa_438 3 3 0.00000144258
Magnolia biondii Chr06 6 CH_mbi_18 10 11 4.13592e-29
Magnolia biondii Chr06 6 CH_mbi_305 4 5 0.0000000102809
Magnolia biondii Chr04 6 CH_mbi_610 3 3 0.00000470565
Malus domestica Chr10 6 CH_mdo_146 5 6 0.000000000000406432
Manihot esculenta Chromosome10 6 CH_mes_215 4 4 0.00000000093246
Olea europaea chr18 6 CH_oeu_277 3 9 0.0000301313
Oryza sativa ssp. japonica chr04 6 CH_osa_367 3 4 0.00000478521
Petunia axillaris Peaxi162Scf00139 6 CH_pax_164 4 5 0.0000000381956
Punica granatum NC_045130.1 6 CH_pgr_64 6 9 0.00000000000000771148
Prunus persica Pp04 6 CH_ppe_412 3 3 0.00000137729
Pisum sativum chr1LG6 6 CH_psa_291 3 4 0.00000137124
Papaver somniferum NC_039363.1 6 CH_pso_152 8 26 0.0000000000000509902
Papaver somniferum NC_039363.1 6 CH_pso_308 5 7 0.0000000011056
Papaver somniferum NC_039358.1 6 CH_pso_62 10 27 1.8893e-19
Quercus lobata 9 6 CH_qlo_1062 3 3 0.00000615756
Quercus lobata 4 6 CH_qlo_1067 5 59 0.00000687944
Quercus lobata 5 6 CH_qlo_261 7 13 4.35691e-16
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_645 3 3 0.000000393344
Rhododendron simsii chr07 6 CH_rsi_12 15 25 3.07645e-40
Striga asiatica scaffold5 6 CH_sas_14 4 4 0.0000000000924584
Salvia bowleyana GWHASIU00000003 6 CH_sbo_387 3 4 0.00000355163
Salvia bowleyana GWHASIU00000004 6 CH_sbo_467 4 48 0.0000389911
Sechium edule LG04 6 CH_sed_209 3 3 0.00000125974
Sequoiadendron giganteum chr1 6 CH_sgi_142 9 11 7.72567e-24
Sequoiadendron giganteum chr4 6 CH_sgi_383 6 8 0.0000000000000397689
Solanum lycopersicum SL4.0ch02 6 CH_sly_109 6 7 0.000000000000032467
Solanum lycopersicum SL4.0ch10 6 CH_sly_504 3 3 0.0000151153
Schrenkiella parvula ch1-1 6 CH_spa_178 3 3 0.00000758792
Schrenkiella parvula ch7-4 6 CH_spa_33 5 5 0.00000000000246997
Solanum pennellii Spenn-ch02 6 CH_spe_60 6 8 8.78119e-16
Solanum tuberosum ST4.03ch02 6 CH_stu_178 5 6 0.000000000016483
Solanum tuberosum ST4.03ch10 6 CH_stu_487 3 3 0.0000090602
Solanum tuberosum ST4.03ch06 6 CH_stu_488 3 3 0.0000090602
Selenicereus undatus Scaffold_10417 6 CH_sun_395 2 2 0.000726639
Theobroma cacao Chromosome_6 6 CH_tca_142 6 17 0.00000000000468243
Tripterygium wilfordii NC_052242.1 6 CH_twi_120 4 4 0.00000000251885
Tripterygium wilfordii NC_052242.1 6 CH_twi_264 3 3 0.00000531507
Utricularia gibba unitig_52 6 CH_ugi_83 3 3 0.00000367575
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_16 11 66 8.67259e-21
Vanilla planifolia CM028160.1 6 CH_vpl_10 8 11 2.73357e-20

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001