Functional clusters

Information

  • Type InterPro
  • Description Ubiquitin-like domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cicer arietinum L. Ca_LG4_v3 5 CH_car_123 6 23 0.00000234295
Citrus clementina scaffold_6 5 CH_ccl_304 5 6 0.000000160902
Carpinus fangiana Cfa01 5 CH_cfa_351 4 5 0.0000125429
Cardamine hirsuta Chr8 5 CH_chi_44 10 11 2.9806e-19
Capsella rubella scaffold_6 5 CH_cru_100 7 7 0.00000000000158
Manihot esculenta Chromosome13 5 CH_mes_439 4 4 0.0000134712
Nelumbo nucifera chr8 5 CH_nnu_180 7 28 0.0000000456957
Prunus persica Pp08 5 CH_ppe_484 4 4 0.00000988968
Populus trichocarpa Chr17 5 CH_ptr_485 5 10 0.000016457
Salix brachista GWHAAZH00000004 5 CH_sbr_352 4 4 0.00000483363
Tripterygium wilfordii NC_052237.1 5 CH_twi_296 4 4 0.0000126641
Vigna mungo CM024071.1 5 CH_vmu_63 6 6 0.0000000000168967
Cicer arietinum L. Ca_LG4_v3 6 CH_car_123 6 23 0.00000234295
Citrus clementina scaffold_6 6 CH_ccl_304 5 6 0.000000160902
Carpinus fangiana Cfa01 6 CH_cfa_351 4 5 0.0000125429
Cardamine hirsuta Chr8 6 CH_chi_44 10 11 2.9806e-19
Capsella rubella scaffold_6 6 CH_cru_100 7 7 0.00000000000158
Manihot esculenta Chromosome13 6 CH_mes_439 4 4 0.0000134712
Nelumbo nucifera chr8 6 CH_nnu_180 7 28 0.0000000456957
Prunus persica Pp08 6 CH_ppe_484 4 4 0.00000988968
Populus trichocarpa Chr17 6 CH_ptr_485 5 10 0.000016457
Salix brachista GWHAAZH00000004 6 CH_sbr_352 4 4 0.00000483363
Tripterygium wilfordii NC_052237.1 6 CH_twi_296 4 4 0.0000126641
Vigna mungo CM024071.1 6 CH_vmu_63 6 6 0.0000000000168967

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001