Functional clusters
Information
- Type InterPro
- Description Chitinase insertion domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group1 | 5 | CH_ach_155 | 3 | 6 | 0.000000885083 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_9 | 5 | CH_amhyb_473 | 2 | 2 | 0.000841751 |
| Brassica carinata | ChrC09 | 5 | CH_bca_821 | 3 | 6 | 0.00000164471 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_1376 | 3 | 15 | 0.000521047 |
| Corylus avellana | 7 | 5 | CH_cav_16 | 15 | 41 | 6.85303e-31 |
| Coffea canephora | chr6 | 5 | CH_ccan_3 | 7 | 68 | 3.26876e-21 |
| Davidia involucrata | GWHABJS00000085 | 5 | CH_din_360 | 3 | 4 | 0.00000429134 |
| Davidia involucrata | GWHABJS00000085 | 5 | CH_din_361 | 3 | 4 | 0.00000429134 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_25 | 14 | 15 | 1.23589e-41 |
| Helianthus annuus | HanXRQChr05 | 5 | CH_han_295 | 4 | 6 | 0.000000000856739 |
| Nicotiana tabacum | Nitab4.5_0001094 | 5 | CH_nta_140 | 3 | 4 | 0.00000606671 |
| Petunia axillaris | Peaxi162Scf00347 | 5 | CH_pax_18 | 7 | 11 | 3.78222e-19 |
| Prunus persica | Pp07 | 5 | CH_ppe_59 | 7 | 7 | 1.62921e-21 |
| Quercus lobata | CM012294 | 5 | CH_qlo_1092 | 3 | 3 | 0.00000919636 |
| Selenicereus undatus | Scaffold_2055 | 5 | CH_sun_83 | 3 | 4 | 0.000000126717 |
| Trochodendron aralioides | group3 | 5 | CH_tar_120 | 4 | 4 | 0.000000000081805 |
| Theobroma cacao | Chromosome_9 | 5 | CH_tca_33 | 8 | 11 | 2.64478e-23 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 5 | CH_tpr_76 | 4 | 4 | 0.00000000000650703 |
| Tripterygium wilfordii | NC_052254.1 | 5 | CH_twi_139 | 4 | 6 | 0.0000000106389 |
| Actinidia chinensis | Lachesis_group1 | 6 | CH_ach_155 | 3 | 6 | 0.000000885083 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_9 | 6 | CH_amhyb_473 | 2 | 2 | 0.000841751 |
| Brassica carinata | ChrC09 | 6 | CH_bca_821 | 3 | 6 | 0.00000164471 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_1376 | 3 | 15 | 0.000521047 |
| Corylus avellana | 7 | 6 | CH_cav_16 | 15 | 41 | 6.85303e-31 |
| Coffea canephora | chr6 | 6 | CH_ccan_3 | 7 | 68 | 3.26876e-21 |
| Davidia involucrata | GWHABJS00000085 | 6 | CH_din_360 | 3 | 4 | 0.00000429134 |
| Davidia involucrata | GWHABJS00000085 | 6 | CH_din_361 | 3 | 4 | 0.00000429134 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_25 | 14 | 15 | 1.23589e-41 |
| Helianthus annuus | HanXRQChr05 | 6 | CH_han_295 | 4 | 6 | 0.000000000856739 |
| Nicotiana tabacum | Nitab4.5_0001094 | 6 | CH_nta_140 | 3 | 4 | 0.00000606671 |
| Petunia axillaris | Peaxi162Scf00347 | 6 | CH_pax_18 | 7 | 11 | 3.78222e-19 |
| Prunus persica | Pp07 | 6 | CH_ppe_59 | 7 | 7 | 1.62921e-21 |
| Quercus lobata | CM012294 | 6 | CH_qlo_1092 | 3 | 3 | 0.00000919636 |
| Selenicereus undatus | Scaffold_2055 | 6 | CH_sun_83 | 3 | 4 | 0.000000126717 |
| Trochodendron aralioides | group3 | 6 | CH_tar_120 | 4 | 4 | 0.000000000081805 |
| Theobroma cacao | Chromosome_9 | 6 | CH_tca_33 | 8 | 11 | 2.64478e-23 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 6 | CH_tpr_76 | 4 | 4 | 0.00000000000650703 |
| Tripterygium wilfordii | NC_052254.1 | 6 | CH_twi_139 | 4 | 6 | 0.0000000106389 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |