Functional clusters
Information
- Type InterPro
- Description HotDog domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_1 | 5 | CH_aly_636 | 3 | 8 | 0.000562169 |
| Capsella rubella | scaffold_1 | 5 | CH_cru_570 | 3 | 7 | 0.000431266 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_943 | 5 | 44 | 0.00000918063 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_357 | 4 | 6 | 0.000000375957 |
| Gossypium hirsutum | D04 | 5 | CH_ghi_838 | 3 | 3 | 0.000075184 |
| Gossypium raimondii | Chr12 | 5 | CH_gra_398 | 3 | 3 | 0.0000334986 |
| Medicago truncatula | chr5 | 5 | CH_mtr_1011 | 3 | 5 | 0.0000828869 |
| Nelumbo nucifera | chr3 | 5 | CH_nnu_399 | 3 | 6 | 0.0000673863 |
| Trochodendron aralioides | group4 | 5 | CH_tar_440 | 3 | 3 | 0.0000197563 |
| Arabidopsis lyrata | scaffold_1 | 6 | CH_aly_636 | 3 | 8 | 0.000562169 |
| Capsella rubella | scaffold_1 | 6 | CH_cru_570 | 3 | 7 | 0.000431266 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_943 | 5 | 44 | 0.00000918063 |
| Fragaria x ananassa | Fvb6-1 | 6 | CH_fan_763 | 4 | 17 | 0.000048904 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_357 | 4 | 6 | 0.000000375957 |
| Gossypium hirsutum | D04 | 6 | CH_ghi_838 | 3 | 3 | 0.000075184 |
| Gossypium raimondii | Chr12 | 6 | CH_gra_398 | 3 | 3 | 0.0000334986 |
| Medicago truncatula | chr5 | 6 | CH_mtr_1011 | 3 | 5 | 0.0000828869 |
| Nelumbo nucifera | chr3 | 6 | CH_nnu_399 | 3 | 6 | 0.0000673863 |
| Trochodendron aralioides | group4 | 6 | CH_tar_440 | 3 | 3 | 0.0000197563 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |