Functional clusters
Information
- Type InterPro
- Description S-adenosyl-L-methionine-dependent methyltransferase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_344 | 5 | CH_aag_118 | 9 | 22 | 0.000000944109 |
| Amborella trichopoda | AmTr_v1.0_scaffold00061 | 5 | CH_atr_540 | 4 | 6 | 0.000464281 |
| Brassica carinata | ChrC08 | 5 | CH_bca_1242 | 5 | 7 | 0.0000498645 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_152 | 11 | 22 | 0.0000000000000798696 |
| Cucumis sativus L. | chr7 | 5 | CH_csa_201 | 6 | 8 | 0.000000295496 |
| Eucalyptus grandis | Chr07 | 5 | CH_egr_1130 | 8 | 37 | 0.000108779 |
| Erythranthe guttata | scaffold_9 | 5 | CH_egut_618 | 4 | 4 | 0.000236211 |
| Eutrema salsugineum | scaffold_9 | 5 | CH_esa_429 | 4 | 4 | 0.000304382 |
| Helianthus annuus | HanXRQChr10 | 5 | CH_han_1169 | 4 | 5 | 0.000783629 |
| Lonicera japonica | GWHAAZE00000008 | 5 | CH_lonja_867 | 6 | 18 | 0.000168357 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 5 | CH_lsa_849 | 4 | 5 | 0.000660848 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_879 | 8 | 40 | 0.0000130821 |
| Simmondsia chinensis | GWHAASQ00000009 | 5 | CH_sci_431 | 6 | 17 | 0.000498608 |
| Solanum pennellii | Spenn-ch08 | 5 | CH_spe_324 | 8 | 31 | 0.000000425312 |
| Anthoceros agrestis | Sc2ySwM_344 | 6 | CH_aag_118 | 9 | 22 | 0.000000944109 |
| Amborella trichopoda | AmTr_v1.0_scaffold00061 | 6 | CH_atr_540 | 4 | 6 | 0.000464281 |
| Brassica carinata | ChrC08 | 6 | CH_bca_1242 | 5 | 7 | 0.0000498645 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_152 | 11 | 22 | 0.0000000000000798696 |
| Cucumis sativus L. | chr7 | 6 | CH_csa_201 | 6 | 8 | 0.000000295496 |
| Eucalyptus grandis | Chr07 | 6 | CH_egr_1130 | 8 | 37 | 0.000108779 |
| Erythranthe guttata | scaffold_9 | 6 | CH_egut_618 | 4 | 4 | 0.000236211 |
| Eutrema salsugineum | scaffold_9 | 6 | CH_esa_429 | 4 | 4 | 0.000304382 |
| Fragaria x ananassa | Fvb3-3 | 6 | CH_fan_870 | 6 | 16 | 0.000155206 |
| Helianthus annuus | HanXRQChr10 | 6 | CH_han_1169 | 4 | 5 | 0.000783629 |
| Lonicera japonica | GWHAAZE00000008 | 6 | CH_lonja_867 | 6 | 18 | 0.000168357 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 6 | CH_lsa_849 | 4 | 5 | 0.000660848 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_879 | 8 | 40 | 0.0000130821 |
| Simmondsia chinensis | GWHAASQ00000009 | 6 | CH_sci_431 | 6 | 17 | 0.000498608 |
| Solanum pennellii | Spenn-ch08 | 6 | CH_spe_324 | 8 | 31 | 0.000000425312 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |