Functional clusters

Information

  • Type InterPro
  • Description Nucleotide-diphospho-sugar transferases

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr2 5 CH_ccan_198 5 39 0.000000419568
Cucumis sativus L. chr4 5 CH_csa_289 4 4 0.0000169139
Daucus carota DCARv2_Chr5 5 CH_dca_70 8 11 0.0000000000018667
Helianthus annuus HanXRQChr14 5 CH_han_185 10 29 0.00000000000151276
Medicago truncatula chr1 5 CH_mtr_1020 4 6 0.0000970341
Papaver somniferum NC_039366.1 5 CH_pso_181 11 50 0.000000000000394398
Papaver somniferum NC_039368.1 5 CH_pso_225 9 29 0.000000000014332
Solanum lycopersicum SL4.0ch04 5 CH_sly_559 4 5 0.0000564453
Trifolium pratense Tp57577_TGAC_v2_LG1 5 CH_tpr_326 5 8 0.00000390131
Coffea canephora chr2 6 CH_ccan_198 5 39 0.000000419568
Cucumis melo chr07 6 CH_cme_332 4 6 0.000141588
Cucumis sativus L. chr4 6 CH_csa_289 4 4 0.0000169139
Daucus carota DCARv2_Chr5 6 CH_dca_70 8 11 0.0000000000018667
Helianthus annuus HanXRQChr14 6 CH_han_185 10 29 0.00000000000151276
Medicago truncatula chr1 6 CH_mtr_1020 4 6 0.0000970341
Papaver somniferum NC_039366.1 6 CH_pso_181 11 50 0.000000000000394398
Papaver somniferum NC_039368.1 6 CH_pso_225 9 29 0.000000000014332
Solanum lycopersicum SL4.0ch04 6 CH_sly_559 4 5 0.0000564453
Trifolium pratense Tp57577_TGAC_v2_LG1 6 CH_tpr_326 5 8 0.00000390131

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001