Functional clusters

Information

  • Type InterPro
  • Description LIM-domain binding protein/SEUSS

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-9 5 CH_aar_422 2 3 0.000821031
Arabidopsis lyrata scaffold_7 5 CH_aly_617 2 2 0.000396027
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_1315 2 2 0.000838273
Arabidopsis thaliana Chr4 5 CH_ath_476 2 2 0.000171895
Brassica carinata ChrC06 5 CH_bca_214 4 4 0.000000000053335
Brassica oleracea C7 5 CH_bol_246 3 3 0.0000000897457
Brassica rapa A03 5 CH_bra_614 2 2 0.000901558
Cardamine hirsuta Chr7 5 CH_chi_290 3 4 0.000000286643
Chenopodium quinoa C_Quinoa_Scaffold_1611 5 CH_cqu_1075 2 2 0.000995025
Capsella rubella scaffold_7 5 CH_cru_272 3 4 0.000000320735
Lupinus albus Lalb_Chr19 5 CH_lal_207 3 3 0.000000231376
Malus domestica Chr07 5 CH_mdo_1246 2 2 0.000379212
Oryza sativa ssp. japonica chr11 5 CH_osa_593 2 2 0.000158437
Physcomitrium patens Chr25 5 CH_ppa_25 4 6 0.00000000130404
Phaseolus vulgaris Chr04 5 CH_pvu_618 2 2 0.000440836
Striga asiatica scaffold221 5 CH_sas_235 2 2 0.000625371
Salvia bowleyana GWHASIU00000002 5 CH_sbo_660 2 2 0.000272988
Solanum lycopersicum SL4.0ch06 5 CH_sly_818 2 2 0.000352164
Schrenkiella parvula ch7-4 5 CH_spa_132 3 4 0.00000037192
Solanum pennellii Spenn-ch06 5 CH_spe_733 2 2 0.000266874
Aethionema arabicum LG-9 6 CH_aar_422 2 3 0.000821031
Arabidopsis lyrata scaffold_7 6 CH_aly_617 2 2 0.000396027
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_1315 2 2 0.000838273
Arabidopsis thaliana Chr4 6 CH_ath_476 2 2 0.000171895
Brassica carinata ChrC06 6 CH_bca_214 4 4 0.000000000053335
Brassica oleracea C7 6 CH_bol_246 3 3 0.0000000897457
Brassica rapa A03 6 CH_bra_614 2 2 0.000901558
Cardamine hirsuta Chr7 6 CH_chi_290 3 4 0.000000286643
Chenopodium quinoa C_Quinoa_Scaffold_1611 6 CH_cqu_1075 2 2 0.000995025
Capsella rubella scaffold_7 6 CH_cru_272 3 4 0.000000320735
Lupinus albus Lalb_Chr19 6 CH_lal_207 3 3 0.000000231376
Malus domestica Chr07 6 CH_mdo_1246 2 2 0.000379212
Oryza sativa ssp. japonica chr11 6 CH_osa_593 2 2 0.000158437
Physcomitrium patens Chr25 6 CH_ppa_25 4 6 0.00000000130404
Phaseolus vulgaris Chr04 6 CH_pvu_618 2 2 0.000440836
Striga asiatica scaffold221 6 CH_sas_235 2 2 0.000625371
Salvia bowleyana GWHASIU00000002 6 CH_sbo_660 2 2 0.000272988
Solanum lycopersicum SL4.0ch06 6 CH_sly_818 2 2 0.000352164
Schrenkiella parvula ch7-4 6 CH_spa_132 3 4 0.00000037192
Solanum pennellii Spenn-ch06 6 CH_spe_733 2 2 0.000266874

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001