Functional clusters

Information

  • Type InterPro
  • Description Viral movement protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 5 CH_acertr_115 6 23 0.0000000000729483
Arabidopsis lyrata scaffold_1 5 CH_aly_683 2 2 0.000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 5 CH_arhy_113 10 10 2.04965e-19
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 5 CH_arhy_1131 4 6 0.000407334
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 5 CH_arhy_250 7 7 0.00000000000240388
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 5 CH_arhy_326 11 56 0.000000000111391
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 5 CH_arhy_855 4 4 0.0000273513
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 5 CH_arhy_984 4 5 0.000136266
Brassica napus C04 5 CH_bna_1236 2 2 0.000278425
Beta vulgaris Chr5_EL10_PGA_scaffold2 5 CH_bvu_137 3 3 0.0000000102821
Citrullus lanatus CG_Chr03 5 CH_cla_126 5 56 0.00000080887
Chenopodium quinoa C_Quinoa_Scaffold_1971 5 CH_cqu_1012 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_1817 5 CH_cqu_300 3 3 0.0000000673536
Cucumis sativus L. chr1 5 CH_csa_422 2 2 0.000250428
Eutrema salsugineum scaffold_12 5 CH_esa_434 3 9 0.000408175
Helianthus annuus HanXRQChr09 5 CH_han_438 3 5 0.0000000895919
Punica granatum NC_045130.1 5 CH_pgr_476 2 3 0.000225098
Pisum sativum chr3LG5 5 CH_psa_355 3 16 0.00000913747
Salvia bowleyana GWHASIU00000008 5 CH_sbo_581 2 2 0.000136494
Sechium edule LG08 5 CH_sed_410 2 2 0.000214026
Acer truncatum chr11 6 CH_acertr_115 6 23 0.0000000000729483
Arabidopsis lyrata scaffold_1 6 CH_aly_683 2 2 0.000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 6 CH_arhy_113 10 10 2.04965e-19
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 6 CH_arhy_1131 4 6 0.000407334
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 6 CH_arhy_250 7 7 0.00000000000240388
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 6 CH_arhy_326 11 56 0.000000000111391
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 6 CH_arhy_855 4 4 0.0000273513
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 6 CH_arhy_984 4 5 0.000136266
Brassica napus C04 6 CH_bna_1236 2 2 0.000278425
Beta vulgaris Chr5_EL10_PGA_scaffold2 6 CH_bvu_137 3 3 0.0000000102821
Citrullus lanatus CG_Chr03 6 CH_cla_126 5 56 0.00000080887
Chenopodium quinoa C_Quinoa_Scaffold_1971 6 CH_cqu_1012 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_1817 6 CH_cqu_300 3 3 0.0000000673536
Cucumis sativus L. chr1 6 CH_csa_422 2 2 0.000250428
Eutrema salsugineum scaffold_12 6 CH_esa_434 3 9 0.000408175
Helianthus annuus HanXRQChr09 6 CH_han_438 3 5 0.0000000895919
Punica granatum NC_045130.1 6 CH_pgr_476 2 3 0.000225098
Pisum sativum chr3LG5 6 CH_psa_355 3 16 0.00000913747
Salvia bowleyana GWHASIU00000008 6 CH_sbo_581 2 2 0.000136494
Sechium edule LG08 6 CH_sed_410 2 2 0.000214026

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001