Functional clusters

Information

  • Type InterPro
  • Description Short transmembrane mitochondrial protein 1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C1 5 CH_bol_731 2 2 0.000326861
Coffea canephora chr2 5 CH_ccan_436 2 4 0.0000766598
Carpinus fangiana Cfa04 5 CH_cfa_253 3 4 0.000000344124
Erythranthe guttata scaffold_2 5 CH_egut_667 2 2 0.000436888
Glycine max Gm08 5 CH_gma_954 2 2 0.00079707
Medicago truncatula chr2 5 CH_mtr_633 3 5 0.000000506369
Nelumbo nucifera chr6 5 CH_nnu_538 2 3 0.000433498
Oryza sativa ssp. japonica chr08 5 CH_osa_784 2 2 0.000950562
Prunus persica Pp05 5 CH_ppe_808 2 3 0.000671324
Salix brachista GWHAAZH00000014 5 CH_sbr_472 2 2 0.000063014
Solanum pennellii Spenn-ch01 5 CH_spe_655 2 2 0.000133437
Solanum tuberosum ST4.03ch01 5 CH_stu_606 2 2 0.0000512453
Brassica oleracea C1 6 CH_bol_731 2 2 0.000326861
Coffea canephora chr2 6 CH_ccan_436 2 4 0.0000766598
Carpinus fangiana Cfa04 6 CH_cfa_253 3 4 0.000000344124
Erythranthe guttata scaffold_2 6 CH_egut_667 2 2 0.000436888
Glycine max Gm08 6 CH_gma_954 2 2 0.00079707
Medicago truncatula chr2 6 CH_mtr_633 3 5 0.000000506369
Nelumbo nucifera chr6 6 CH_nnu_538 2 3 0.000433498
Oryza sativa ssp. japonica chr08 6 CH_osa_784 2 2 0.000950562
Prunus persica Pp05 6 CH_ppe_808 2 3 0.000671324
Salix brachista GWHAAZH00000014 6 CH_sbr_472 2 2 0.000063014
Solanum pennellii Spenn-ch01 6 CH_spe_655 2 2 0.000133437
Solanum tuberosum ST4.03ch01 6 CH_stu_606 2 2 0.0000512453

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001