Functional clusters
Information
- Type InterPro
- Description Harbinger transposase-derived nuclease domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 5 | CH_arhy_796 | 5 | 7 | 0.0000142981 |
| Oryza sativa ssp. japonica | chr05 | 5 | CH_osa_674 | 3 | 6 | 0.000375469 |
| Rhododendron simsii | chr05 | 5 | CH_rsi_994 | 3 | 4 | 0.000730114 |
| Salix brachista | GWHAAZH00000018 | 5 | CH_sbr_350 | 4 | 21 | 0.00000447586 |
| Selenicereus undatus | Scaffold_33678 | 5 | CH_sun_136 | 3 | 4 | 0.00000905807 |
| Vanilla planifolia | CM028158.1 | 5 | CH_vpl_737 | 3 | 15 | 0.000816952 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 6 | CH_arhy_796 | 5 | 7 | 0.0000142981 |
| Oryza sativa ssp. japonica | chr05 | 6 | CH_osa_674 | 3 | 6 | 0.000375469 |
| Rhododendron simsii | chr05 | 6 | CH_rsi_994 | 3 | 4 | 0.000730114 |
| Salix brachista | GWHAAZH00000018 | 6 | CH_sbr_350 | 4 | 21 | 0.00000447586 |
| Selenicereus undatus | Scaffold_33678 | 6 | CH_sun_136 | 3 | 4 | 0.00000905807 |
| Vanilla planifolia | CM028158.1 | 6 | CH_vpl_737 | 3 | 15 | 0.000816952 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |