Functional clusters

Information

  • Type InterPro
  • Description Heat shock transcription factor family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB06 5 CH_bca_139 9 54 0.000000000000902296
Brassica carinata ChrB04 5 CH_bca_237 5 5 0.000000000144026
Brassica napus A04 5 CH_bna_915 5 37 0.0000300096
Brassica rapa A04 5 CH_bra_342 5 41 0.0000435127
Lonicera japonica GWHAAZE00000008 5 CH_lonja_265 5 7 0.0000000000533118
Magnolia biondii Chr17 5 CH_mbi_608 3 3 0.00000470565
Medicago truncatula chr6 5 CH_mtr_433 5 12 0.00000000635748
Pisum sativum chr5LG3 5 CH_psa_505 3 4 0.000116494
Sequoiadendron giganteum chr10 5 CH_sgi_56 12 17 2.67531e-34
Brassica carinata ChrB06 6 CH_bca_139 9 54 0.000000000000902296
Brassica carinata ChrB04 6 CH_bca_237 5 5 0.000000000144026
Brassica napus A04 6 CH_bna_915 5 37 0.0000300096
Brassica rapa A04 6 CH_bra_342 5 41 0.0000435127
Lonicera japonica GWHAAZE00000008 6 CH_lonja_265 5 7 0.0000000000533118
Magnolia biondii Chr17 6 CH_mbi_608 3 3 0.00000470565
Medicago truncatula chr6 6 CH_mtr_433 5 12 0.00000000635748
Pisum sativum chr5LG3 6 CH_psa_505 3 4 0.000116494
Sequoiadendron giganteum chr10 6 CH_sgi_56 12 17 2.67531e-34

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001