Functional clusters

Information

  • Type InterPro
  • Description Pre-mRNA-processing-splicing factor 8

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group9 5 CH_ach_376 2 2 0.000162964
Brassica napus C05 5 CH_bna_520 3 3 0.000000421715
Brassica napus C04 5 CH_bna_879 3 8 0.0000236026
Brassica oleracea C5 5 CH_bol_898 2 2 0.000915212
Ceratophyllum demersum 1 5 CH_cde_339 2 2 0.000236939
Cardamine hirsuta Chr7 5 CH_chi_791 2 2 0.000691204
Carica papaya supercontig_67 5 CH_cpa_364 2 2 0.0000950661
Capsella rubella scaffold_7 5 CH_cru_538 2 2 0.000219346
Gossypium hirsutum D10 5 CH_ghi_1215 2 2 0.000560733
Gossypium hirsutum A05 5 CH_ghi_428 3 3 0.0000000374316
Helianthus annuus HanXRQChr16 5 CH_han_104 5 5 3.51243e-16
Malus domestica Chr09 5 CH_mdo_198 4 4 0.000000000020614
Malus domestica Chr09 5 CH_mdo_483 3 3 0.000000181193
Nelumbo nucifera chr1 5 CH_nnu_611 2 2 0.000722526
Striga asiatica scaffold332 5 CH_sas_177 2 2 0.000187611
Utricularia gibba unitig_747 5 CH_ugi_33 3 3 0.0000000100982
Actinidia chinensis Lachesis_group9 6 CH_ach_376 2 2 0.000162964
Brassica napus C05 6 CH_bna_520 3 3 0.000000421715
Brassica napus C04 6 CH_bna_879 3 8 0.0000236026
Brassica oleracea C5 6 CH_bol_898 2 2 0.000915212
Ceratophyllum demersum 1 6 CH_cde_339 2 2 0.000236939
Cardamine hirsuta Chr7 6 CH_chi_791 2 2 0.000691204
Carica papaya supercontig_67 6 CH_cpa_364 2 2 0.0000950661
Capsella rubella scaffold_7 6 CH_cru_538 2 2 0.000219346
Fragaria x ananassa Fvb6-3 6 CH_fan_142 4 4 0.0000000000259439
Fragaria x ananassa Fvb6-2 6 CH_fan_143 4 4 0.0000000000259439
Gossypium hirsutum D10 6 CH_ghi_1215 2 2 0.000560733
Gossypium hirsutum A05 6 CH_ghi_428 3 3 0.0000000374316
Helianthus annuus HanXRQChr16 6 CH_han_104 5 5 3.51243e-16
Malus domestica Chr09 6 CH_mdo_198 4 4 0.000000000020614
Malus domestica Chr09 6 CH_mdo_483 3 3 0.000000181193
Nelumbo nucifera chr1 6 CH_nnu_611 2 2 0.000722526
Striga asiatica scaffold332 6 CH_sas_177 2 2 0.000187611
Utricularia gibba unitig_747 6 CH_ugi_33 3 3 0.0000000100982

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001