Functional clusters
Information
- Type InterPro
- Description P-loop containing nucleoside triphosphate hydrolase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr5 | 5 | CH_acertr_682 | 14 | 53 | 0.000141673 |
| Actinidia chinensis | Lachesis_group14 | 5 | CH_ach_308 | 6 | 6 | 0.000151327 |
| Actinidia chinensis | Lachesis_group12 | 5 | CH_ach_66 | 22 | 73 | 0.00000000210308 |
| Aquilegia oxysepala | CHR04 | 5 | CH_aox_448 | 10 | 23 | 0.000259922 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.06 | 5 | CH_arhy_607 | 13 | 24 | 0.000000771677 |
| Brassica carinata | ChrB03 | 5 | CH_bca_1850 | 11 | 34 | 0.000527897 |
| Camellia sinensis var. sinensis | Chr3 | 5 | CH_camsi_719 | 11 | 21 | 0.00000309568 |
| Capsicum annuum | PGAv.1.6.scaffold309 | 5 | CH_can_185 | 21 | 45 | 0.000000000562003 |
| Carya illinoinensis | Chr16 | 5 | CH_cil_711 | 12 | 34 | 0.000242657 |
| Corchorus olitorius | AWUE01016262.1 | 5 | CH_col_123 | 9 | 22 | 0.000284733 |
| Daucus carota | DCARv2_Chr1 | 5 | CH_dca_641 | 7 | 10 | 0.00041089 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 5 | CH_eca_420 | 10 | 19 | 0.0000068903 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_740 | 23 | 77 | 0.000000213006 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_441 | 18 | 71 | 0.00000449968 |
| Fragaria vesca | Fvb7 | 5 | CH_fve_478 | 9 | 14 | 0.0000101088 |
| Gossypium hirsutum | D05 | 5 | CH_ghi_188 | 27 | 76 | 0.000000000000230248 |
| Gossypium hirsutum | D05 | 5 | CH_ghi_574 | 21 | 80 | 0.000000981442 |
| Helianthus annuus | HanXRQChr04 | 5 | CH_han_1104 | 15 | 64 | 0.00050156 |
| Lupinus albus | Lalb_Chr20 | 5 | CH_lal_461 | 11 | 30 | 0.000107998 |
| Lonicera japonica | GWHAAZE00000005 | 5 | CH_lonja_315 | 23 | 75 | 0.00000000124824 |
| Lonicera japonica | GWHAAZE00000021 | 5 | CH_lonja_855 | 17 | 70 | 0.000145517 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 5 | CH_lsa_399 | 21 | 78 | 0.00000054485 |
| Medicago truncatula | chr7 | 5 | CH_mtr_679 | 16 | 42 | 0.000000923468 |
| Medicago truncatula | chr8 | 5 | CH_mtr_862 | 19 | 72 | 0.0000185394 |
| Prunus persica | Pp02 | 5 | CH_ppe_547 | 18 | 68 | 0.0000334041 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_403 | 12 | 38 | 0.0000390138 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_484 | 7 | 8 | 0.000096243 |
| Quercus lobata | 3 | 5 | CH_qlo_1749 | 20 | 80 | 0.000666224 |
| Quercus lobata | 9 | 5 | CH_qlo_707 | 25 | 77 | 0.0000000196002 |
| Rosa chinensis | RcHm_v2.0_Chr0c44 | 5 | CH_rch_473 | 15 | 32 | 0.0000000121732 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_828 | 14 | 39 | 0.00000618361 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_901 | 13 | 35 | 0.0000173531 |
| Salvia bowleyana | GWHASIU00000007 | 5 | CH_sbo_723 | 16 | 80 | 0.000556586 |
| Simmondsia chinensis | GWHAASQ00000006 | 5 | CH_sci_337 | 11 | 30 | 0.00013565 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_1375 | 21 | 64 | 0.000003287 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_385 | 22 | 35 | 0.000000000000041434 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_738 | 16 | 25 | 0.00000000154898 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_871 | 25 | 71 | 0.00000000851773 |
| Solanum lycopersicum | SL4.0ch08 | 5 | CH_sly_100 | 26 | 68 | 0.00000000000000789826 |
| Selaginella moellendorffii | scaffold_141 | 5 | CH_smo_130 | 9 | 12 | 0.00000274804 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_231 | 14 | 37 | 0.0000000198943 |
| Solanum pennellii | Spenn-ch05 | 5 | CH_spe_490 | 16 | 80 | 0.0000224077 |
| Solanum tuberosum | ST4.03ch11 | 5 | CH_stu_663 | 16 | 74 | 0.000128605 |
| Solanum tuberosum | ST4.03ch05 | 5 | CH_stu_821 | 6 | 7 | 0.000418316 |
| Selenicereus undatus | Scaffold_10417 | 5 | CH_sun_361 | 13 | 57 | 0.000662202 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 5 | CH_tpr_531 | 7 | 8 | 0.000100586 |
| Vigna mungo | CM024070.1 | 5 | CH_vmu_391 | 17 | 76 | 0.000116701 |
| Vigna mungo | CM024075.1 | 5 | CH_vmu_392 | 7 | 9 | 0.000131538 |
| Vanilla planifolia | CM028162.1 | 5 | CH_vpl_583 | 11 | 35 | 0.000406575 |
| Vitis vinifera | chr9 | 5 | CH_vvi_103 | 25 | 56 | 0.0000000000000170942 |
| Acer truncatum | chr5 | 6 | CH_acertr_682 | 14 | 53 | 0.000141673 |
| Actinidia chinensis | Lachesis_group14 | 6 | CH_ach_308 | 6 | 6 | 0.000151327 |
| Actinidia chinensis | Lachesis_group12 | 6 | CH_ach_66 | 22 | 73 | 0.00000000210308 |
| Aquilegia oxysepala | CHR04 | 6 | CH_aox_448 | 10 | 23 | 0.000259922 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.06 | 6 | CH_arhy_607 | 13 | 24 | 0.000000771677 |
| Brassica carinata | ChrB03 | 6 | CH_bca_1850 | 11 | 34 | 0.000527897 |
| Camellia sinensis var. sinensis | Chr3 | 6 | CH_camsi_719 | 11 | 21 | 0.00000309568 |
| Capsicum annuum | PGAv.1.6.scaffold309 | 6 | CH_can_185 | 21 | 45 | 0.000000000562003 |
| Carya illinoinensis | Chr16 | 6 | CH_cil_711 | 12 | 34 | 0.000242657 |
| Corchorus olitorius | AWUE01016262.1 | 6 | CH_col_123 | 9 | 22 | 0.000284733 |
| Daucus carota | DCARv2_Chr1 | 6 | CH_dca_641 | 7 | 10 | 0.00041089 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 6 | CH_eca_420 | 10 | 19 | 0.0000068903 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_740 | 23 | 77 | 0.000000213006 |
| Fragaria x ananassa | Fvb4-4 | 6 | CH_fan_1267 | 9 | 19 | 0.000878441 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_441 | 18 | 71 | 0.00000449968 |
| Fragaria vesca | Fvb7 | 6 | CH_fve_478 | 9 | 14 | 0.0000101088 |
| Gossypium hirsutum | D05 | 6 | CH_ghi_188 | 27 | 76 | 0.000000000000230248 |
| Gossypium hirsutum | D05 | 6 | CH_ghi_574 | 21 | 80 | 0.000000981442 |
| Helianthus annuus | HanXRQChr04 | 6 | CH_han_1104 | 15 | 64 | 0.00050156 |
| Lupinus albus | Lalb_Chr20 | 6 | CH_lal_461 | 11 | 30 | 0.000107998 |
| Lonicera japonica | GWHAAZE00000005 | 6 | CH_lonja_315 | 23 | 75 | 0.00000000124824 |
| Lonicera japonica | GWHAAZE00000021 | 6 | CH_lonja_855 | 17 | 70 | 0.000145517 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 6 | CH_lsa_399 | 21 | 78 | 0.00000054485 |
| Medicago truncatula | chr7 | 6 | CH_mtr_679 | 16 | 42 | 0.000000923468 |
| Medicago truncatula | chr8 | 6 | CH_mtr_862 | 19 | 72 | 0.0000185394 |
| Prunus persica | Pp02 | 6 | CH_ppe_547 | 18 | 68 | 0.0000334041 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_403 | 12 | 38 | 0.0000390138 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_484 | 7 | 8 | 0.000096243 |
| Quercus lobata | 3 | 6 | CH_qlo_1749 | 20 | 80 | 0.000666224 |
| Quercus lobata | 9 | 6 | CH_qlo_707 | 25 | 77 | 0.0000000196002 |
| Rosa chinensis | RcHm_v2.0_Chr0c44 | 6 | CH_rch_473 | 15 | 32 | 0.0000000121732 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_828 | 14 | 39 | 0.00000618361 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_901 | 13 | 35 | 0.0000173531 |
| Salvia bowleyana | GWHASIU00000007 | 6 | CH_sbo_723 | 16 | 80 | 0.000556586 |
| Simmondsia chinensis | GWHAASQ00000006 | 6 | CH_sci_337 | 11 | 30 | 0.00013565 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_1375 | 21 | 64 | 0.000003287 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_385 | 22 | 35 | 0.000000000000041434 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_738 | 16 | 25 | 0.00000000154898 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_871 | 25 | 71 | 0.00000000851773 |
| Solanum lycopersicum | SL4.0ch08 | 6 | CH_sly_100 | 26 | 68 | 0.00000000000000789826 |
| Selaginella moellendorffii | scaffold_141 | 6 | CH_smo_130 | 9 | 12 | 0.00000274804 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_231 | 14 | 37 | 0.0000000198943 |
| Solanum pennellii | Spenn-ch05 | 6 | CH_spe_490 | 16 | 80 | 0.0000224077 |
| Solanum tuberosum | ST4.03ch11 | 6 | CH_stu_663 | 16 | 74 | 0.000128605 |
| Solanum tuberosum | ST4.03ch05 | 6 | CH_stu_821 | 6 | 7 | 0.000418316 |
| Selenicereus undatus | Scaffold_10417 | 6 | CH_sun_361 | 13 | 57 | 0.000662202 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 6 | CH_tpr_531 | 7 | 8 | 0.000100586 |
| Vigna mungo | CM024070.1 | 6 | CH_vmu_391 | 17 | 76 | 0.000116701 |
| Vigna mungo | CM024075.1 | 6 | CH_vmu_392 | 7 | 9 | 0.000131538 |
| Vanilla planifolia | CM028162.1 | 6 | CH_vpl_583 | 11 | 35 | 0.000406575 |
| Vitis vinifera | chr9 | 6 | CH_vvi_103 | 25 | 56 | 0.0000000000000170942 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |