Functional clusters
Information
- Type InterPro
- Description GroEL-like equatorial domain superfamily
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 5 | CH_amhyb_284 | 3 | 5 | 0.00021482 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 5 | CH_amhyb_431 | 3 | 7 | 0.00075081 |
Brassica carinata | ChrC08 | 5 | CH_bca_1354 | 3 | 3 | 0.0000778407 |
Citrus clementina | scaffold_3 | 5 | CH_ccl_675 | 4 | 43 | 0.000365732 |
Quercus lobata | 11 | 5 | CH_qlo_723 | 6 | 34 | 0.0000000300287 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 6 | CH_amhyb_284 | 3 | 5 | 0.00021482 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 6 | CH_amhyb_431 | 3 | 7 | 0.00075081 |
Brassica carinata | ChrC08 | 6 | CH_bca_1354 | 3 | 3 | 0.0000778407 |
Citrus clementina | scaffold_3 | 6 | CH_ccl_675 | 4 | 43 | 0.000365732 |
Quercus lobata | 11 | 6 | CH_qlo_723 | 6 | 34 | 0.0000000300287 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |