Functional clusters
Information
- Type InterPro
- Description PNPase/RNase PH domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Coffea canephora | chr6 | 5 | CH_ccan_667 | 2 | 3 | 0.000574945 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_344 | 7 | 35 | 0.000000000000151751 |
| Gossypium hirsutum | D01 | 5 | CH_ghi_558 | 4 | 14 | 0.000000721507 |
| Quercus lobata | CM012294 | 5 | CH_qlo_489 | 5 | 11 | 0.0000000000492305 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_682 | 4 | 12 | 0.000000686568 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_1426 | 3 | 4 | 0.00000647732 |
| Coffea canephora | chr6 | 6 | CH_ccan_667 | 2 | 3 | 0.000574945 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_344 | 7 | 35 | 0.000000000000151751 |
| Gossypium hirsutum | D01 | 6 | CH_ghi_558 | 4 | 14 | 0.000000721507 |
| Quercus lobata | CM012294 | 6 | CH_qlo_489 | 5 | 11 | 0.0000000000492305 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_682 | 4 | 12 | 0.000000686568 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_1426 | 3 | 4 | 0.00000647732 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |