Functional clusters
Information
- Type InterPro
- Description P-type ATPase, subfamily IB
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_733 | 3 | 5 | 0.00000378378 |
| Capsicum annuum | PGAv.1.6.scaffold774 | 5 | CH_can_767 | 2 | 2 | 0.000495663 |
| Citrus clementina | scaffold_5 | 5 | CH_ccl_487 | 3 | 8 | 0.0000474289 |
| Carya illinoinensis | Chr11 | 5 | CH_cil_401 | 3 | 3 | 0.000000950893 |
| Davidia involucrata | GWHABJS00000001 | 5 | CH_din_165 | 4 | 6 | 0.00000000118188 |
| Gossypium hirsutum | A08 | 5 | CH_ghi_655 | 3 | 4 | 0.00000414456 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_414 | 3 | 3 | 0.000000871892 |
| Magnolia biondii | Chr17 | 5 | CH_mbi_662 | 3 | 7 | 0.0000148509 |
| Malus domestica | Chr01 | 5 | CH_mdo_432 | 4 | 10 | 0.0000000624536 |
| Quercus lobata | 11 | 5 | CH_qlo_884 | 3 | 3 | 0.00000047981 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_868 | 4 | 43 | 0.0000115448 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1189 | 3 | 3 | 0.00000042718 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_733 | 3 | 5 | 0.00000378378 |
| Capsicum annuum | PGAv.1.6.scaffold774 | 6 | CH_can_767 | 2 | 2 | 0.000495663 |
| Citrus clementina | scaffold_5 | 6 | CH_ccl_487 | 3 | 8 | 0.0000474289 |
| Carya illinoinensis | Chr11 | 6 | CH_cil_401 | 3 | 3 | 0.000000950893 |
| Davidia involucrata | GWHABJS00000001 | 6 | CH_din_165 | 4 | 6 | 0.00000000118188 |
| Gossypium hirsutum | A08 | 6 | CH_ghi_655 | 3 | 4 | 0.00000414456 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_414 | 3 | 3 | 0.000000871892 |
| Magnolia biondii | Chr17 | 6 | CH_mbi_662 | 3 | 7 | 0.0000148509 |
| Malus domestica | Chr01 | 6 | CH_mdo_432 | 4 | 10 | 0.0000000624536 |
| Quercus lobata | 11 | 6 | CH_qlo_884 | 3 | 3 | 0.00000047981 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_868 | 4 | 43 | 0.0000115448 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1189 | 3 | 3 | 0.00000042718 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |