Functional clusters
Information
- Type InterPro
- Description Cystatin
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr1 | 5 | CH_acertr_285 | 4 | 20 | 0.0000000762829 |
| Actinidia chinensis | Lachesis_group24 | 5 | CH_ach_533 | 2 | 2 | 0.000543213 |
| Amborella trichopoda | AmTr_v1.0_scaffold00055 | 5 | CH_atr_56 | 5 | 6 | 0.0000000000000376411 |
| Camellia sinensis var. sinensis | Chr11 | 5 | CH_camsi_608 | 3 | 5 | 0.000000630717 |
| Cannabis sativa | NC_044375.1 | 5 | CH_cansat_584 | 2 | 2 | 0.000656642 |
| Carya illinoinensis | Chr13 | 5 | CH_cil_374 | 3 | 3 | 0.000000484091 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_254 | 3 | 4 | 0.000000854109 |
| Davidia involucrata | GWHABJS00000007 | 5 | CH_din_204 | 4 | 6 | 0.0000000133909 |
| Davidia involucrata | GWHABJS00000004 | 5 | CH_din_341 | 3 | 3 | 0.00000255134 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_867 | 3 | 6 | 0.00000205475 |
| Gossypium hirsutum | D06 | 5 | CH_ghi_1214 | 2 | 2 | 0.000560733 |
| Glycine max | Gm14 | 5 | CH_gma_375 | 3 | 4 | 0.000000484019 |
| Gossypium raimondii | Chr10 | 5 | CH_gra_573 | 2 | 2 | 0.000321664 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 5 | CH_lsa_440 | 3 | 6 | 0.00000158486 |
| Oryza sativa ssp. japonica | chr03 | 5 | CH_osa_310 | 3 | 3 | 0.000000920439 |
| Oryza sativa ssp. japonica | chr03 | 5 | CH_osa_356 | 3 | 4 | 0.000003681 |
| Prunus persica | Pp02 | 5 | CH_ppe_658 | 3 | 26 | 0.000216562 |
| Quercus lobata | 7 | 5 | CH_qlo_1848 | 2 | 3 | 0.000929264 |
| Salvia bowleyana | GWHASIU00000006 | 5 | CH_sbo_284 | 3 | 3 | 0.0000000621034 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_817 | 2 | 2 | 0.000352164 |
| Solanum pennellii | Spenn-ch06 | 5 | CH_spe_732 | 2 | 2 | 0.000266874 |
| Solanum tuberosum | ST4.03ch06 | 5 | CH_stu_322 | 3 | 3 | 0.0000000393922 |
| Acer truncatum | chr1 | 6 | CH_acertr_285 | 4 | 20 | 0.0000000762829 |
| Actinidia chinensis | Lachesis_group24 | 6 | CH_ach_533 | 2 | 2 | 0.000543213 |
| Amborella trichopoda | AmTr_v1.0_scaffold00055 | 6 | CH_atr_56 | 5 | 6 | 0.0000000000000376411 |
| Camellia sinensis var. sinensis | Chr11 | 6 | CH_camsi_608 | 3 | 5 | 0.000000630717 |
| Cannabis sativa | NC_044375.1 | 6 | CH_cansat_584 | 2 | 2 | 0.000656642 |
| Carya illinoinensis | Chr13 | 6 | CH_cil_374 | 3 | 3 | 0.000000484091 |
| Cucumis melo | chr01 | 6 | CH_cme_194 | 4 | 16 | 0.00000080011 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_254 | 3 | 4 | 0.000000854109 |
| Davidia involucrata | GWHABJS00000007 | 6 | CH_din_204 | 4 | 6 | 0.0000000133909 |
| Davidia involucrata | GWHABJS00000004 | 6 | CH_din_341 | 3 | 3 | 0.00000255134 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_867 | 3 | 6 | 0.00000205475 |
| Gossypium hirsutum | D06 | 6 | CH_ghi_1214 | 2 | 2 | 0.000560733 |
| Glycine max | Gm14 | 6 | CH_gma_375 | 3 | 4 | 0.000000484019 |
| Gossypium raimondii | Chr10 | 6 | CH_gra_573 | 2 | 2 | 0.000321664 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 6 | CH_lsa_440 | 3 | 6 | 0.00000158486 |
| Oryza sativa ssp. japonica | chr03 | 6 | CH_osa_310 | 3 | 3 | 0.000000920439 |
| Oryza sativa ssp. japonica | chr03 | 6 | CH_osa_356 | 3 | 4 | 0.000003681 |
| Prunus persica | Pp02 | 6 | CH_ppe_658 | 3 | 26 | 0.000216562 |
| Quercus lobata | 7 | 6 | CH_qlo_1848 | 2 | 3 | 0.000929264 |
| Salvia bowleyana | GWHASIU00000006 | 6 | CH_sbo_284 | 3 | 3 | 0.0000000621034 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_817 | 2 | 2 | 0.000352164 |
| Solanum pennellii | Spenn-ch06 | 6 | CH_spe_732 | 2 | 2 | 0.000266874 |
| Solanum tuberosum | ST4.03ch06 | 6 | CH_stu_322 | 3 | 3 | 0.0000000393922 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |