Functional clusters

Information

  • Type InterPro
  • Description Importin subunit beta-1, plants

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 5 CH_arhy_1092 2 2 0.000299383
Coffea canephora chr2 5 CH_ccan_711 2 12 0.000843234
Citrullus lanatus CG_Chr01 5 CH_cla_262 2 3 0.000266123
Cucumis sativus L. chr5 5 CH_csa_379 2 3 0.000250417
Durio zibethinus NW_019167827.1 5 CH_dzi_481 2 2 0.000278093
Durio zibethinus NW_019168381.1 5 CH_dzi_482 2 2 0.000278093
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_520 2 2 0.0000448722
Gossypium hirsutum A09 5 CH_ghi_1249 2 2 0.000747644
Gossypium hirsutum A12 5 CH_ghi_1250 2 2 0.000747644
Gossypium hirsutum D09 5 CH_ghi_1251 2 2 0.000747644
Gossypium hirsutum D12 5 CH_ghi_1252 2 2 0.000747644
Gossypium raimondii Chr06 5 CH_gra_561 2 2 0.000321664
Gossypium raimondii Chr08 5 CH_gra_562 2 2 0.000321664
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_860 2 2 0.00077101
Manihot esculenta Chromosome01 5 CH_mes_657 2 3 0.00054954
Medicago truncatula chr3 5 CH_mtr_1241 2 3 0.000369764
Olea europaea chr18 5 CH_oeu_610 2 2 0.000533789
Petunia axillaris Peaxi162Scf00618 5 CH_pax_613 2 2 0.000422134
Sechium edule LG01 5 CH_sed_443 2 2 0.000428052
Sapria himalayana scaffold3_21451142 5 CH_shi_456 2 4 0.000343063
Trochodendron aralioides group1 5 CH_tar_864 2 2 0.000600366
Theobroma cacao Chromosome_3 5 CH_tca_519 2 2 0.0000732386
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_459 3 12 0.0000660949
Vanilla planifolia JADCNL010000330.1 5 CH_vpl_526 2 2 0.000221664
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 6 CH_arhy_1092 2 2 0.000299383
Coffea canephora chr2 6 CH_ccan_711 2 12 0.000843234
Citrullus lanatus CG_Chr01 6 CH_cla_262 2 3 0.000266123
Cucumis sativus L. chr5 6 CH_csa_379 2 3 0.000250417
Durio zibethinus NW_019167827.1 6 CH_dzi_481 2 2 0.000278093
Durio zibethinus NW_019168381.1 6 CH_dzi_482 2 2 0.000278093
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_520 2 2 0.0000448722
Gossypium hirsutum A09 6 CH_ghi_1249 2 2 0.000747644
Gossypium hirsutum A12 6 CH_ghi_1250 2 2 0.000747644
Gossypium hirsutum D09 6 CH_ghi_1251 2 2 0.000747644
Gossypium hirsutum D12 6 CH_ghi_1252 2 2 0.000747644
Gossypium raimondii Chr06 6 CH_gra_561 2 2 0.000321664
Gossypium raimondii Chr08 6 CH_gra_562 2 2 0.000321664
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_860 2 2 0.00077101
Manihot esculenta Chromosome01 6 CH_mes_657 2 3 0.00054954
Medicago truncatula chr3 6 CH_mtr_1241 2 3 0.000369764
Olea europaea chr18 6 CH_oeu_610 2 2 0.000533789
Petunia axillaris Peaxi162Scf00618 6 CH_pax_613 2 2 0.000422134
Sechium edule LG01 6 CH_sed_443 2 2 0.000428052
Sapria himalayana scaffold3_21451142 6 CH_shi_456 2 4 0.000343063
Trochodendron aralioides group1 6 CH_tar_864 2 2 0.000600366
Theobroma cacao Chromosome_3 6 CH_tca_519 2 2 0.0000732386
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_459 3 12 0.0000660949
Vanilla planifolia JADCNL010000330.1 6 CH_vpl_526 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001