Functional clusters
Information
- Type InterPro
- Description Transcription factor NFYB/HAP3
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_1 | 5 | CH_aly_709 | 3 | 17 | 0.000974154 |
| Brassica carinata | ChrC03 | 5 | CH_bca_1384 | 3 | 5 | 0.0000907174 |
| Brassica napus | C02 | 5 | CH_bna_1008 | 3 | 5 | 0.0000592962 |
| Capsicum annuum | PGAv.1.6.scaffold623 | 5 | CH_can_134 | 5 | 5 | 0.00000000000104922 |
| Cucumis sativus L. | chr3 | 5 | CH_csa_72 | 5 | 5 | 0.000000000000288496 |
| Davidia involucrata | GWHABJS00000001 | 5 | CH_din_694 | 3 | 8 | 0.000322953 |
| Eucalyptus grandis | Chr02 | 5 | CH_egr_668 | 4 | 8 | 0.000000042103 |
| Erythranthe guttata | scaffold_2 | 5 | CH_egut_101 | 8 | 13 | 0.00000000000000620492 |
| Erythranthe guttata | scaffold_5 | 5 | CH_egut_140 | 9 | 45 | 0.00000000000712381 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_613 | 3 | 3 | 0.000220464 |
| Erythranthe guttata | scaffold_5 | 5 | CH_egut_627 | 4 | 13 | 0.000299967 |
| Lonicera japonica | GWHAAZE00000005 | 5 | CH_lonja_62 | 10 | 13 | 6.56385e-26 |
| Medicago truncatula | chr5 | 5 | CH_mtr_1369 | 3 | 13 | 0.000699881 |
| Solanum lycopersicum | SL4.0ch05 | 5 | CH_sly_144 | 6 | 12 | 0.00000000000427371 |
| Solanum lycopersicum | SL4.0ch07 | 5 | CH_sly_207 | 5 | 10 | 0.000000001806 |
| Solanum lycopersicum | SL4.0ch02 | 5 | CH_sly_503 | 3 | 3 | 0.0000151153 |
| Solanum pennellii | Spenn-ch05 | 5 | CH_spe_19 | 9 | 12 | 2.23789e-23 |
| Solanum pennellii | Spenn-ch07 | 5 | CH_spe_331 | 4 | 9 | 0.000000582542 |
| Solanum tuberosum | ST4.03ch05 | 5 | CH_stu_57 | 8 | 16 | 7.64053e-19 |
| Arabidopsis lyrata | scaffold_1 | 6 | CH_aly_709 | 3 | 17 | 0.000974154 |
| Brassica carinata | ChrC03 | 6 | CH_bca_1384 | 3 | 5 | 0.0000907174 |
| Brassica napus | C02 | 6 | CH_bna_1008 | 3 | 5 | 0.0000592962 |
| Capsicum annuum | PGAv.1.6.scaffold623 | 6 | CH_can_134 | 5 | 5 | 0.00000000000104922 |
| Cucumis sativus L. | chr3 | 6 | CH_csa_72 | 5 | 5 | 0.000000000000288496 |
| Davidia involucrata | GWHABJS00000001 | 6 | CH_din_694 | 3 | 8 | 0.000322953 |
| Eucalyptus grandis | Chr02 | 6 | CH_egr_668 | 4 | 8 | 0.000000042103 |
| Erythranthe guttata | scaffold_2 | 6 | CH_egut_101 | 8 | 13 | 0.00000000000000620492 |
| Erythranthe guttata | scaffold_5 | 6 | CH_egut_140 | 9 | 45 | 0.00000000000712381 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_613 | 3 | 3 | 0.000220464 |
| Erythranthe guttata | scaffold_5 | 6 | CH_egut_627 | 4 | 13 | 0.000299967 |
| Lonicera japonica | GWHAAZE00000005 | 6 | CH_lonja_62 | 10 | 13 | 6.56385e-26 |
| Medicago truncatula | chr5 | 6 | CH_mtr_1369 | 3 | 13 | 0.000699881 |
| Solanum lycopersicum | SL4.0ch05 | 6 | CH_sly_144 | 6 | 12 | 0.00000000000427371 |
| Solanum lycopersicum | SL4.0ch07 | 6 | CH_sly_207 | 5 | 10 | 0.000000001806 |
| Solanum lycopersicum | SL4.0ch02 | 6 | CH_sly_503 | 3 | 3 | 0.0000151153 |
| Solanum pennellii | Spenn-ch05 | 6 | CH_spe_19 | 9 | 12 | 2.23789e-23 |
| Solanum pennellii | Spenn-ch07 | 6 | CH_spe_331 | 4 | 9 | 0.000000582542 |
| Solanum tuberosum | ST4.03ch05 | 6 | CH_stu_57 | 8 | 16 | 7.64053e-19 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |