Functional clusters

Information

  • Type InterPro
  • Description Cleavage and polyadenylation specificity factor subunit 2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group3 5 CH_ach_371 2 2 0.000162964
Arabidopsis lyrata scaffold_6 5 CH_aly_193 3 4 0.0000000261395
Coffea canephora chr2 5 CH_ccan_306 2 3 0.0000127767
Fragaria vesca Fvb7 5 CH_fve_557 3 42 0.0000596935
Glycine max Gm11 5 CH_gma_52 6 9 4.16889e-18
Lonicera japonica GWHAAZE00000001 5 CH_lonja_936 2 2 0.000179662
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1403 2 2 0.000597979
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_756 4 66 0.00000204829
Sequoiadendron giganteum chr7 5 CH_sgi_1793 2 2 0.0000487151
Sapria himalayana scaffold10_15062905 5 CH_shi_33 4 4 0.00000000000056092
Theobroma cacao Chromosome_3 5 CH_tca_586 2 3 0.000219708
Vigna mungo CM024077.1 5 CH_vmu_354 2 2 0.0000646141
Actinidia chinensis Lachesis_group3 6 CH_ach_371 2 2 0.000162964
Arabidopsis lyrata scaffold_6 6 CH_aly_193 3 4 0.0000000261395
Coffea canephora chr2 6 CH_ccan_306 2 3 0.0000127767
Fragaria vesca Fvb7 6 CH_fve_557 3 42 0.0000596935
Glycine max Gm11 6 CH_gma_52 6 9 4.16889e-18
Lonicera japonica GWHAAZE00000001 6 CH_lonja_936 2 2 0.000179662
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1403 2 2 0.000597979
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_756 4 66 0.00000204829
Sequoiadendron giganteum chr7 6 CH_sgi_1793 2 2 0.0000487151
Sapria himalayana scaffold10_15062905 6 CH_shi_33 4 4 0.00000000000056092
Theobroma cacao Chromosome_3 6 CH_tca_586 2 3 0.000219708
Vigna mungo CM024077.1 6 CH_vmu_354 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001