Functional clusters

Information

  • Type InterPro
  • Description 5'-3' exoribonuclease

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group24 5 CH_ach_40 4 4 0.0000000000336639
Amborella trichopoda AmTr_v1.0_scaffold00025 5 CH_atr_507 2 2 0.000238322
Beta vulgaris Chr7_EL10_PGA_scaffold5 5 CH_bvu_477 2 2 0.00049675
Corylus avellana 5 5 CH_cav_378 3 4 0.00000775723
Ceratophyllum demersum 3 5 CH_cde_13 5 5 0.0000000000000367785
Carica papaya supercontig_76 5 CH_cpa_174 3 3 0.000000474494
Davidia involucrata GWHABJS00000002 5 CH_din_752 2 2 0.000500125
Gossypium raimondii Chr13 5 CH_gra_397 3 7 0.0000331692
Lonicera japonica GWHAAZE00000001 5 CH_lonja_299 4 5 0.000000000405922
Malus domestica Chr00 5 CH_mdo_1422 2 2 0.000796344
Nicotiana tabacum Nitab4.5_0000080 5 CH_nta_92 3 3 0.000000180611
Quercus lobata 9 5 CH_qlo_1720 2 2 0.000516289
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_469 5 58 0.0000000108878
Sequoiadendron giganteum chr10 5 CH_sgi_2114 2 2 0.000146145
Sapria himalayana scaffold46_4242896 5 CH_shi_526 3 8 0.000554571
Theobroma cacao Chromosome_3 5 CH_tca_296 3 3 0.0000000804614
Vanilla planifolia CM028153.1 5 CH_vpl_173 3 3 0.000000458609
Actinidia chinensis Lachesis_group24 6 CH_ach_40 4 4 0.0000000000336639
Amborella trichopoda AmTr_v1.0_scaffold00025 6 CH_atr_507 2 2 0.000238322
Beta vulgaris Chr7_EL10_PGA_scaffold5 6 CH_bvu_477 2 2 0.00049675
Corylus avellana 5 6 CH_cav_378 3 4 0.00000775723
Ceratophyllum demersum 3 6 CH_cde_13 5 5 0.0000000000000367785
Carica papaya supercontig_76 6 CH_cpa_174 3 3 0.000000474494
Davidia involucrata GWHABJS00000002 6 CH_din_752 2 2 0.000500125
Gossypium raimondii Chr13 6 CH_gra_397 3 7 0.0000331692
Lonicera japonica GWHAAZE00000001 6 CH_lonja_299 4 5 0.000000000405922
Malus domestica Chr00 6 CH_mdo_1422 2 2 0.000796344
Nicotiana tabacum Nitab4.5_0000080 6 CH_nta_92 3 3 0.000000180611
Quercus lobata 9 6 CH_qlo_1720 2 2 0.000516289
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_469 5 58 0.0000000108878
Sequoiadendron giganteum chr10 6 CH_sgi_2114 2 2 0.000146145
Sapria himalayana scaffold46_4242896 6 CH_shi_526 3 8 0.000554571
Theobroma cacao Chromosome_3 6 CH_tca_296 3 3 0.0000000804614
Vanilla planifolia CM028153.1 6 CH_vpl_173 3 3 0.000000458609

Available child term results

Ontology identifier Description Number of clusters
IPR017151 5'-3' exoribonuclease type 2 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001