Functional clusters
Information
- Type InterPro
- Description Lon protease
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 5 | CH_acertr_475 | 4 | 73 | 0.0000170538 |
| Actinidia chinensis | Lachesis_group14 | 5 | CH_ach_532 | 2 | 2 | 0.000543213 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_173 | 3 | 3 | 0.0000000123118 |
| Brassica carinata | ChrC08 | 5 | CH_bca_669 | 3 | 3 | 0.000000466096 |
| Brassica napus | C06 | 5 | CH_bna_251 | 4 | 5 | 0.000000000574062 |
| Brassica oleracea | C1 | 5 | CH_bol_107 | 4 | 4 | 0.000000000104874 |
| Chara braunii | BFEA01000353 | 5 | CH_cbr_101 | 3 | 7 | 0.0000010862 |
| Ceratophyllum demersum | 9 | 5 | CH_cde_524 | 2 | 2 | 0.000789796 |
| Davidia involucrata | GWHABJS00000003 | 5 | CH_din_751 | 2 | 2 | 0.000500125 |
| Lupinus albus | Lalb_Chr05 | 5 | CH_lal_708 | 2 | 2 | 0.000524824 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_182 | 4 | 6 | 0.0000000000257736 |
| Medicago truncatula | chr1 | 5 | CH_mtr_668 | 3 | 7 | 0.000000886081 |
| Nicotiana tabacum | Nitab4.5_0000155 | 5 | CH_nta_216 | 2 | 2 | 0.000109727 |
| Quercus lobata | 3 | 5 | CH_qlo_549 | 4 | 6 | 0.000000000433439 |
| Quercus lobata | 3 | 5 | CH_qlo_840 | 3 | 3 | 0.000000223911 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_2296 | 2 | 2 | 0.000292291 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_2297 | 2 | 2 | 0.000292291 |
| Sapria himalayana | scaffold26_7557582 | 5 | CH_shi_314 | 2 | 2 | 0.0000571804 |
| Utricularia gibba | unitig_744 | 5 | CH_ugi_265 | 2 | 2 | 0.000246144 |
| Vanilla planifolia | CM028157.1 | 5 | CH_vpl_119 | 3 | 3 | 0.0000000327578 |
| Acer truncatum | chr2 | 6 | CH_acertr_475 | 4 | 73 | 0.0000170538 |
| Actinidia chinensis | Lachesis_group14 | 6 | CH_ach_532 | 2 | 2 | 0.000543213 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_173 | 3 | 3 | 0.0000000123118 |
| Brassica carinata | ChrC08 | 6 | CH_bca_669 | 3 | 3 | 0.000000466096 |
| Brassica napus | C06 | 6 | CH_bna_251 | 4 | 5 | 0.000000000574062 |
| Brassica oleracea | C1 | 6 | CH_bol_107 | 4 | 4 | 0.000000000104874 |
| Chara braunii | BFEA01000353 | 6 | CH_cbr_101 | 3 | 7 | 0.0000010862 |
| Ceratophyllum demersum | 9 | 6 | CH_cde_524 | 2 | 2 | 0.000789796 |
| Davidia involucrata | GWHABJS00000003 | 6 | CH_din_751 | 2 | 2 | 0.000500125 |
| Lupinus albus | Lalb_Chr05 | 6 | CH_lal_708 | 2 | 2 | 0.000524824 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_182 | 4 | 6 | 0.0000000000257736 |
| Medicago truncatula | chr1 | 6 | CH_mtr_668 | 3 | 7 | 0.000000886081 |
| Nicotiana tabacum | Nitab4.5_0000155 | 6 | CH_nta_216 | 2 | 2 | 0.000109727 |
| Quercus lobata | 3 | 6 | CH_qlo_549 | 4 | 6 | 0.000000000433439 |
| Quercus lobata | 3 | 6 | CH_qlo_840 | 3 | 3 | 0.000000223911 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_2296 | 2 | 2 | 0.000292291 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_2297 | 2 | 2 | 0.000292291 |
| Sapria himalayana | scaffold26_7557582 | 6 | CH_shi_314 | 2 | 2 | 0.0000571804 |
| Utricularia gibba | unitig_744 | 6 | CH_ugi_265 | 2 | 2 | 0.000246144 |
| Vanilla planifolia | CM028157.1 | 6 | CH_vpl_119 | 3 | 3 | 0.0000000327578 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |