Functional clusters
Information
- Type InterPro
- Description Callose synthase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group9 | 5 | CH_ach_156 | 3 | 3 | 0.00000097379 |
| Actinidia chinensis | Lachesis_group15 | 5 | CH_ach_67 | 4 | 6 | 0.00000000356934 |
| Brassica carinata | ChrC02 | 5 | CH_bca_726 | 3 | 5 | 0.000000822412 |
| Brassica napus | C04 | 5 | CH_bna_430 | 4 | 14 | 0.0000000743494 |
| Brassica napus | A05 | 5 | CH_bna_728 | 3 | 5 | 0.00000500666 |
| Brassica oleracea | C4 | 5 | CH_bol_196 | 4 | 15 | 0.0000000180031 |
| Brassica rapa | A05 | 5 | CH_bra_235 | 3 | 6 | 0.0000019348 |
| Ceratophyllum demersum | 3 | 5 | CH_cde_474 | 2 | 3 | 0.000710769 |
| Carya illinoinensis | Chr13 | 5 | CH_cil_738 | 2 | 2 | 0.000371897 |
| Citrullus lanatus | CG_Chr09 | 5 | CH_cla_274 | 2 | 2 | 0.000266134 |
| Gossypium hirsutum | A08 | 5 | CH_ghi_246 | 4 | 6 | 0.0000000000128499 |
| Gossypium raimondii | Chr04 | 5 | CH_gra_416 | 2 | 2 | 0.0000536107 |
| Helianthus annuus | HanXRQChr07 | 5 | CH_han_1153 | 2 | 4 | 0.000695527 |
| Oryza sativa ssp. japonica | chr03 | 5 | CH_osa_570 | 2 | 2 | 0.000158437 |
| Phaseolus vulgaris | Chr08 | 5 | CH_pvu_418 | 3 | 12 | 0.0000622695 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_142 | 5 | 5 | 1.13669e-16 |
| Trochodendron aralioides | group18 | 5 | CH_tar_938 | 2 | 2 | 0.000900549 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_147 | 3 | 3 | 0.0000000129529 |
| Vanilla planifolia | CM028153.1 | 5 | CH_vpl_367 | 2 | 2 | 0.000073888 |
| Zea mays | 5 | 5 | CH_zma_131 | 3 | 3 | 0.0000000156868 |
| Actinidia chinensis | Lachesis_group9 | 6 | CH_ach_156 | 3 | 3 | 0.00000097379 |
| Actinidia chinensis | Lachesis_group15 | 6 | CH_ach_67 | 4 | 6 | 0.00000000356934 |
| Brassica carinata | ChrC02 | 6 | CH_bca_726 | 3 | 5 | 0.000000822412 |
| Brassica napus | C04 | 6 | CH_bna_430 | 4 | 14 | 0.0000000743494 |
| Brassica napus | A05 | 6 | CH_bna_728 | 3 | 5 | 0.00000500666 |
| Brassica oleracea | C4 | 6 | CH_bol_196 | 4 | 15 | 0.0000000180031 |
| Brassica rapa | A05 | 6 | CH_bra_235 | 3 | 6 | 0.0000019348 |
| Ceratophyllum demersum | 3 | 6 | CH_cde_474 | 2 | 3 | 0.000710769 |
| Carya illinoinensis | Chr13 | 6 | CH_cil_738 | 2 | 2 | 0.000371897 |
| Citrullus lanatus | CG_Chr09 | 6 | CH_cla_274 | 2 | 2 | 0.000266134 |
| Gossypium hirsutum | A08 | 6 | CH_ghi_246 | 4 | 6 | 0.0000000000128499 |
| Gossypium raimondii | Chr04 | 6 | CH_gra_416 | 2 | 2 | 0.0000536107 |
| Helianthus annuus | HanXRQChr07 | 6 | CH_han_1153 | 2 | 4 | 0.000695527 |
| Oryza sativa ssp. japonica | chr03 | 6 | CH_osa_570 | 2 | 2 | 0.000158437 |
| Phaseolus vulgaris | Chr08 | 6 | CH_pvu_418 | 3 | 12 | 0.0000622695 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_142 | 5 | 5 | 1.13669e-16 |
| Trochodendron aralioides | group18 | 6 | CH_tar_938 | 2 | 2 | 0.000900549 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_147 | 3 | 3 | 0.0000000129529 |
| Vanilla planifolia | CM028153.1 | 6 | CH_vpl_367 | 2 | 2 | 0.000073888 |
| Zea mays | 5 | 6 | CH_zma_131 | 3 | 3 | 0.0000000156868 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |