Functional clusters

Information

  • Type InterPro
  • Description Vacuolar protein sorting-associated protein 13

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 5 CH_acertr_899 2 2 0.000422982
Camellia sinensis var. sinensis Chr13 5 CH_camsi_1430 2 2 0.000687821
Capsicum annuum PGAv.1.6.scaffold836 5 CH_can_580 2 2 0.0000826105
Cicer arietinum L. Ca_LG5_v3 5 CH_car_412 2 2 0.000778301
Corylus avellana 11 5 CH_cav_283 3 3 0.000000740683
Corylus avellana 6 5 CH_cav_328 3 4 0.00000296211
Chara braunii BFEA01000016 5 CH_cbr_330 2 3 0.000647303
Cardamine hirsuta Chr5 5 CH_chi_624 2 2 0.000207361
Citrullus lanatus CG_Chr01 5 CH_cla_121 3 4 0.000000472152
Chenopodium quinoa C_Quinoa_Scaffold_2924 5 CH_cqu_1011 2 2 0.000710732
Davidia involucrata GWHABJS00000021 5 CH_din_575 2 2 0.000150038
Eucalyptus grandis Chr11 5 CH_egr_1328 2 3 0.000526721
Erythranthe guttata scaffold_8 5 CH_egut_320 3 3 0.000000445382
Erythranthe guttata scaffold_12 5 CH_egut_451 4 56 0.0000295444
Gossypium hirsutum D04 5 CH_ghi_1131 2 2 0.000400523
Lonicera japonica GWHAAZE00000007 5 CH_lonja_1074 2 2 0.000359324
Magnolia biondii Chr16 5 CH_mbi_1042 2 2 0.000291397
Nelumbo nucifera chr4 5 CH_nnu_609 2 2 0.000722526
Nicotiana tabacum Nitab4.5_0000108 5 CH_nta_249 2 3 0.000329164
Olea europaea scaffold1515 5 CH_oeu_546 2 2 0.000320273
Oryza sativa ssp. japonica chr08 5 CH_osa_695 2 4 0.000475289
Petunia axillaris Peaxi162Scf00126 5 CH_pax_643 2 2 0.000422134
Petunia axillaris Peaxi162Scf00535 5 CH_pax_644 2 2 0.000422134
Phaseolus vulgaris Chr02 5 CH_pvu_135 4 5 0.0000000000892415
Quercus lobata 4 5 CH_qlo_1719 2 2 0.000516289
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1247 2 2 0.000239192
Sequoiadendron giganteum chr3 5 CH_sgi_600 4 5 0.0000000000260123
Sapria himalayana scaffold4_21100006 5 CH_shi_109 3 4 0.0000000196176
Solanum lycopersicum SL4.0ch11 5 CH_sly_727 2 2 0.000176082
Trochodendron aralioides group9 5 CH_tar_686 2 2 0.00018011
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_204 3 3 0.000000129529
Vigna mungo CM024069.1 5 CH_vmu_538 2 2 0.000387685
Vigna mungo CM024069.1 5 CH_vmu_539 2 2 0.000387685
Vanilla planifolia CM028150.1 5 CH_vpl_45 5 8 0.0000000000031535
Zea mays 6 5 CH_zma_494 2 2 0.000511313
Acer truncatum chr8 6 CH_acertr_899 2 2 0.000422982
Camellia sinensis var. sinensis Chr13 6 CH_camsi_1430 2 2 0.000687821
Capsicum annuum PGAv.1.6.scaffold836 6 CH_can_580 2 2 0.0000826105
Cicer arietinum L. Ca_LG5_v3 6 CH_car_412 2 2 0.000778301
Corylus avellana 11 6 CH_cav_283 3 3 0.000000740683
Corylus avellana 6 6 CH_cav_328 3 4 0.00000296211
Chara braunii BFEA01000016 6 CH_cbr_330 2 3 0.000647303
Cardamine hirsuta Chr5 6 CH_chi_624 2 2 0.000207361
Citrullus lanatus CG_Chr01 6 CH_cla_121 3 4 0.000000472152
Cucumis melo chr02 6 CH_cme_181 3 7 0.000000267
Chenopodium quinoa C_Quinoa_Scaffold_2924 6 CH_cqu_1011 2 2 0.000710732
Davidia involucrata GWHABJS00000021 6 CH_din_575 2 2 0.000150038
Eucalyptus grandis Chr11 6 CH_egr_1328 2 3 0.000526721
Erythranthe guttata scaffold_8 6 CH_egut_320 3 3 0.000000445382
Erythranthe guttata scaffold_12 6 CH_egut_451 4 56 0.0000295444
Gossypium hirsutum D04 6 CH_ghi_1131 2 2 0.000400523
Lonicera japonica GWHAAZE00000007 6 CH_lonja_1074 2 2 0.000359324
Magnolia biondii Chr16 6 CH_mbi_1042 2 2 0.000291397
Nelumbo nucifera chr4 6 CH_nnu_609 2 2 0.000722526
Nicotiana tabacum Nitab4.5_0000108 6 CH_nta_249 2 3 0.000329164
Olea europaea scaffold1515 6 CH_oeu_546 2 2 0.000320273
Oryza sativa ssp. japonica chr08 6 CH_osa_695 2 4 0.000475289
Petunia axillaris Peaxi162Scf00126 6 CH_pax_643 2 2 0.000422134
Petunia axillaris Peaxi162Scf00535 6 CH_pax_644 2 2 0.000422134
Phaseolus vulgaris Chr02 6 CH_pvu_135 4 5 0.0000000000892415
Quercus lobata 4 6 CH_qlo_1719 2 2 0.000516289
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1247 2 2 0.000239192
Sequoiadendron giganteum chr3 6 CH_sgi_600 4 5 0.0000000000260123
Sapria himalayana scaffold4_21100006 6 CH_shi_109 3 4 0.0000000196176
Solanum lycopersicum SL4.0ch11 6 CH_sly_727 2 2 0.000176082
Trochodendron aralioides group9 6 CH_tar_686 2 2 0.00018011
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_204 3 3 0.000000129529
Vigna mungo CM024069.1 6 CH_vmu_538 2 2 0.000387685
Vigna mungo CM024069.1 6 CH_vmu_539 2 2 0.000387685
Vanilla planifolia CM028150.1 6 CH_vpl_45 5 8 0.0000000000031535
Zea mays 6 6 CH_zma_494 2 2 0.000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001