Functional clusters
Information
- Type InterPro
- Description Serine/threonine-protein kinase TOR
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr5 | 5 | CH_acertr_302 | 3 | 3 | 0.0000001491 |
| Acer truncatum | chr4 | 5 | CH_acertr_419 | 3 | 7 | 0.00000521611 |
| Capsicum annuum | PGAv.1.6.scaffold411 | 5 | CH_can_740 | 3 | 12 | 0.000370643 |
| Corylus avellana | 9 | 5 | CH_cav_54 | 5 | 6 | 0.0000000000000015552 |
| Coffea canephora | chr2 | 5 | CH_ccan_474 | 2 | 12 | 0.000119248 |
| Ceratophyllum demersum | 4 | 5 | CH_cde_69 | 3 | 3 | 0.0000000374281 |
| Gossypium hirsutum | A01 | 5 | CH_ghi_1307 | 2 | 3 | 0.000801015 |
| Hydrangea macrophylla | Hma1.2p1_0661F.1 | 5 | CH_hma_125 | 3 | 3 | 0.0000000740453 |
| Lupinus albus | Lalb_Chr16 | 5 | CH_lal_528 | 2 | 2 | 0.000157447 |
| Manihot esculenta | Chromosome07 | 5 | CH_mes_504 | 2 | 2 | 0.0000610631 |
| Olea europaea | chr19 | 5 | CH_oeu_461 | 2 | 2 | 0.000160137 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_630 | 2 | 2 | 0.000312981 |
| Quercus lobata | 11 | 5 | CH_qlo_826 | 3 | 4 | 0.000000159926 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_131 | 7 | 7 | 1.05291e-24 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_417 | 3 | 10 | 0.00000247958 |
| Trochodendron aralioides | group11 | 5 | CH_tar_793 | 2 | 2 | 0.00036022 |
| Trochodendron aralioides | group4 | 5 | CH_tar_794 | 2 | 2 | 0.00036022 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_496 | 2 | 2 | 0.0000756974 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_475 | 2 | 2 | 0.0000929238 |
| Acer truncatum | chr5 | 6 | CH_acertr_302 | 3 | 3 | 0.0000001491 |
| Acer truncatum | chr4 | 6 | CH_acertr_419 | 3 | 7 | 0.00000521611 |
| Capsicum annuum | PGAv.1.6.scaffold411 | 6 | CH_can_740 | 3 | 12 | 0.000370643 |
| Corylus avellana | 9 | 6 | CH_cav_54 | 5 | 6 | 0.0000000000000015552 |
| Coffea canephora | chr2 | 6 | CH_ccan_474 | 2 | 12 | 0.000119248 |
| Ceratophyllum demersum | 4 | 6 | CH_cde_69 | 3 | 3 | 0.0000000374281 |
| Gossypium hirsutum | A01 | 6 | CH_ghi_1307 | 2 | 3 | 0.000801015 |
| Hydrangea macrophylla | Hma1.2p1_0661F.1 | 6 | CH_hma_125 | 3 | 3 | 0.0000000740453 |
| Lupinus albus | Lalb_Chr16 | 6 | CH_lal_528 | 2 | 2 | 0.000157447 |
| Manihot esculenta | Chromosome07 | 6 | CH_mes_504 | 2 | 2 | 0.0000610631 |
| Olea europaea | chr19 | 6 | CH_oeu_461 | 2 | 2 | 0.000160137 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_630 | 2 | 2 | 0.000312981 |
| Quercus lobata | 11 | 6 | CH_qlo_826 | 3 | 4 | 0.000000159926 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_131 | 7 | 7 | 1.05291e-24 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_417 | 3 | 10 | 0.00000247958 |
| Trochodendron aralioides | group11 | 6 | CH_tar_793 | 2 | 2 | 0.00036022 |
| Trochodendron aralioides | group4 | 6 | CH_tar_794 | 2 | 2 | 0.00036022 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_496 | 2 | 2 | 0.0000756974 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_475 | 2 | 2 | 0.0000929238 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |