Functional clusters

Information

  • Type InterPro
  • Description GIGANTEA

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr9 5 CH_camsi_1290 2 3 0.000412677
Ceratophyllum demersum 2 5 CH_cde_336 2 2 0.000236939
Carica papaya supercontig_26 5 CH_cpa_358 2 2 0.0000950661
Lupinus albus Lalb_Chr01 5 CH_lal_624 2 2 0.000314895
Lonicera japonica GWHAAZE00000004 5 CH_lonja_934 2 2 0.000179662
Trochodendron aralioides group11 5 CH_tar_685 2 2 0.00018011
Vigna mungo CM024077.1 5 CH_vmu_456 2 2 0.000193842
Vitis vinifera chr18 5 CH_vvi_519 2 2 0.000076063
Camellia sinensis var. sinensis Chr9 6 CH_camsi_1290 2 3 0.000412677
Ceratophyllum demersum 2 6 CH_cde_336 2 2 0.000236939
Carica papaya supercontig_26 6 CH_cpa_358 2 2 0.0000950661
Lupinus albus Lalb_Chr01 6 CH_lal_624 2 2 0.000314895
Lonicera japonica GWHAAZE00000004 6 CH_lonja_934 2 2 0.000179662
Trochodendron aralioides group11 6 CH_tar_685 2 2 0.00018011
Vigna mungo CM024077.1 6 CH_vmu_456 2 2 0.000193842
Vitis vinifera chr18 6 CH_vvi_519 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001