Functional clusters

Information

  • Type InterPro
  • Description Treslin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB08 5 CH_bca_1445 2 2 0.000128259
Hydrangea macrophylla Hma1.2p1_0142F.1 5 CH_hma_101 3 3 0.0000000185113
Lonicera japonica GWHAAZE00000003 5 CH_lonja_933 2 2 0.000179662
Magnolia biondii Chr16 5 CH_mbi_927 2 3 0.000145698
Malus domestica Chr01 5 CH_mdo_1191 2 3 0.00034128
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_982 2 2 0.0000398653
Sapria himalayana scaffold13_12996478 5 CH_shi_311 2 2 0.0000571804
Trochodendron aralioides group0 5 CH_tar_684 2 2 0.00018011
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_474 2 2 0.0000929238
Brassica carinata ChrB08 6 CH_bca_1445 2 2 0.000128259
Hydrangea macrophylla Hma1.2p1_0142F.1 6 CH_hma_101 3 3 0.0000000185113
Lonicera japonica GWHAAZE00000003 6 CH_lonja_933 2 2 0.000179662
Magnolia biondii Chr16 6 CH_mbi_927 2 3 0.000145698
Malus domestica Chr01 6 CH_mdo_1191 2 3 0.00034128
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_982 2 2 0.0000398653
Sapria himalayana scaffold13_12996478 6 CH_shi_311 2 2 0.0000571804
Trochodendron aralioides group0 6 CH_tar_684 2 2 0.00018011
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_474 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001