Functional clusters

Information

  • Type InterPro
  • Description GAG-pre-integrase domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrullus lanatus CG_Chr09 5 CH_cla_254 3 11 0.0001633
Erigeron canadensis Conyza_canadensis_scaffold:9 5 CH_eca_230 25 72 0.0000000315967
Erigeron canadensis Conyza_canadensis_scaffold:9 5 CH_eca_270 24 70 0.000000124263
Erigeron canadensis Conyza_canadensis_scaffold:4 5 CH_eca_347 24 77 0.00000126018
Erigeron canadensis Conyza_canadensis_scaffold:4 5 CH_eca_831 21 80 0.000673733
Solanum pennellii Spenn-ch04 5 CH_spe_249 18 51 0.0000000370761
Solanum pennellii Spenn-ch08 5 CH_spe_285 18 54 0.000000114464
Solanum pennellii Spenn-ch09 5 CH_spe_405 17 57 0.00000346557
Solanum pennellii Spenn-ch01 5 CH_spe_685 16 64 0.000218247
Citrullus lanatus CG_Chr09 6 CH_cla_254 3 11 0.0001633
Erigeron canadensis Conyza_canadensis_scaffold:9 6 CH_eca_230 25 72 0.0000000315967
Erigeron canadensis Conyza_canadensis_scaffold:9 6 CH_eca_270 24 70 0.000000124263
Erigeron canadensis Conyza_canadensis_scaffold:4 6 CH_eca_347 24 77 0.00000126018
Erigeron canadensis Conyza_canadensis_scaffold:4 6 CH_eca_831 21 80 0.000673733
Solanum pennellii Spenn-ch04 6 CH_spe_249 18 51 0.0000000370761
Solanum pennellii Spenn-ch08 6 CH_spe_285 18 54 0.000000114464
Solanum pennellii Spenn-ch09 6 CH_spe_405 17 57 0.00000346557
Solanum pennellii Spenn-ch01 6 CH_spe_685 16 64 0.000218247

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001