Functional clusters
Information
- Type InterPro
- Description Domain of unknown function DUF4283
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-2 | 5 | CH_aar_254 | 4 | 6 | 0.0000594306 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 5 | CH_amhyb_205 | 4 | 9 | 0.0000820747 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 5 | CH_eca_127 | 12 | 80 | 0.000000000157209 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_52 | 14 | 74 | 0.0000000000000361836 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_584 | 8 | 73 | 0.0000906296 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 5 | CH_eca_705 | 4 | 6 | 0.000305782 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 5 | CH_eca_832 | 4 | 7 | 0.000710864 |
| Gossypium raimondii | Chr09 | 5 | CH_gra_270 | 4 | 4 | 0.000000312986 |
| Manihot esculenta | Chromosome04 | 5 | CH_mes_251 | 4 | 6 | 0.0000000102514 |
| Olea europaea | scaffold180 | 5 | CH_oeu_213 | 6 | 26 | 0.00000306951 |
| Olea europaea | scaffold1112 | 5 | CH_oeu_278 | 4 | 6 | 0.000030133 |
| Olea europaea | chr12 | 5 | CH_oeu_651 | 3 | 3 | 0.000755874 |
| Papaver somniferum | NW_020620936.1 | 5 | CH_pso_250 | 9 | 22 | 0.0000000000652112 |
| Populus trichocarpa | Chr17 | 5 | CH_ptr_380 | 3 | 6 | 0.00000100207 |
| Quercus lobata | 4 | 5 | CH_qlo_777 | 8 | 17 | 0.0000000803312 |
| Salix brachista | GWHAAZH00000016 | 5 | CH_sbr_312 | 4 | 4 | 0.00000152003 |
| Sechium edule | LG07 | 5 | CH_sed_416 | 3 | 3 | 0.000235579 |
| Sapria himalayana | scaffold44_4510576 | 5 | CH_shi_13 | 22 | 44 | 4.26483e-18 |
| Sapria himalayana | scaffold126_739157 | 5 | CH_shi_134 | 11 | 20 | 0.000000050503 |
| Sapria himalayana | scaffold103_1210301 | 5 | CH_shi_154 | 18 | 75 | 0.000000116986 |
| Sapria himalayana | scaffold81_1893685 | 5 | CH_shi_161 | 18 | 77 | 0.000000189481 |
| Sapria himalayana | scaffold36_5715340 | 5 | CH_shi_176 | 14 | 44 | 0.000000453786 |
| Sapria himalayana | scaffold40_4792918 | 5 | CH_shi_197 | 11 | 25 | 0.000001174 |
| Sapria himalayana | scaffold2_22354274 | 5 | CH_shi_213 | 11 | 27 | 0.00000325684 |
| Sapria himalayana | scaffold20_10339243 | 5 | CH_shi_219 | 15 | 64 | 0.000010706 |
| Sapria himalayana | scaffold55_3650763 | 5 | CH_shi_43 | 15 | 28 | 0.00000000000663559 |
| Sapria himalayana | scaffold25_7721883 | 5 | CH_shi_449 | 14 | 69 | 0.000312054 |
| Sapria himalayana | scaffold20_10339243 | 5 | CH_shi_450 | 14 | 69 | 0.000312054 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_418 | 4 | 8 | 0.0000226327 |
| Aethionema arabicum | LG-2 | 6 | CH_aar_254 | 4 | 6 | 0.0000594306 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 6 | CH_amhyb_205 | 4 | 9 | 0.0000820747 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 6 | CH_eca_127 | 12 | 80 | 0.000000000157209 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_52 | 14 | 74 | 0.0000000000000361836 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_584 | 8 | 73 | 0.0000906296 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 6 | CH_eca_705 | 4 | 6 | 0.000305782 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 6 | CH_eca_832 | 4 | 7 | 0.000710864 |
| Gossypium raimondii | Chr09 | 6 | CH_gra_270 | 4 | 4 | 0.000000312986 |
| Manihot esculenta | Chromosome04 | 6 | CH_mes_251 | 4 | 6 | 0.0000000102514 |
| Olea europaea | scaffold180 | 6 | CH_oeu_213 | 6 | 26 | 0.00000306951 |
| Olea europaea | scaffold1112 | 6 | CH_oeu_278 | 4 | 6 | 0.000030133 |
| Olea europaea | chr12 | 6 | CH_oeu_651 | 3 | 3 | 0.000755874 |
| Papaver somniferum | NW_020620936.1 | 6 | CH_pso_250 | 9 | 22 | 0.0000000000652112 |
| Populus trichocarpa | Chr17 | 6 | CH_ptr_380 | 3 | 6 | 0.00000100207 |
| Quercus lobata | 4 | 6 | CH_qlo_777 | 8 | 17 | 0.0000000803312 |
| Salix brachista | GWHAAZH00000016 | 6 | CH_sbr_312 | 4 | 4 | 0.00000152003 |
| Sechium edule | LG07 | 6 | CH_sed_416 | 3 | 3 | 0.000235579 |
| Sapria himalayana | scaffold44_4510576 | 6 | CH_shi_13 | 22 | 44 | 4.26483e-18 |
| Sapria himalayana | scaffold126_739157 | 6 | CH_shi_134 | 11 | 20 | 0.000000050503 |
| Sapria himalayana | scaffold103_1210301 | 6 | CH_shi_154 | 18 | 75 | 0.000000116986 |
| Sapria himalayana | scaffold81_1893685 | 6 | CH_shi_161 | 18 | 77 | 0.000000189481 |
| Sapria himalayana | scaffold36_5715340 | 6 | CH_shi_176 | 14 | 44 | 0.000000453786 |
| Sapria himalayana | scaffold40_4792918 | 6 | CH_shi_197 | 11 | 25 | 0.000001174 |
| Sapria himalayana | scaffold2_22354274 | 6 | CH_shi_213 | 11 | 27 | 0.00000325684 |
| Sapria himalayana | scaffold20_10339243 | 6 | CH_shi_219 | 15 | 64 | 0.000010706 |
| Sapria himalayana | scaffold55_3650763 | 6 | CH_shi_43 | 15 | 28 | 0.00000000000663559 |
| Sapria himalayana | scaffold25_7721883 | 6 | CH_shi_449 | 14 | 69 | 0.000312054 |
| Sapria himalayana | scaffold20_10339243 | 6 | CH_shi_450 | 14 | 69 | 0.000312054 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_418 | 4 | 8 | 0.0000226327 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |