Functional clusters

Information

  • Type InterPro
  • Description hAT-like transposase, RNase-H fold

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus C03 5 CH_bna_1261 3 7 0.000332819
Brassica napus C05 5 CH_bna_952 3 4 0.0000380741
Brassica oleracea C5 5 CH_bol_627 3 6 0.000104901
Corylus avellana 7 5 CH_cav_647 2 2 0.000230008
Gossypium hirsutum A02 5 CH_ghi_646 4 11 0.00000365503
Gossypium raimondii Chr05 5 CH_gra_160 6 16 0.000000000154351
Prunus persica Pp01 5 CH_ppe_256 4 4 0.00000000226669
Quercus lobata 6 5 CH_qlo_352 6 6 0.000000000000189532
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_97 6 13 0.000000000105647
Brassica napus C03 6 CH_bna_1261 3 7 0.000332819
Brassica napus C05 6 CH_bna_952 3 4 0.0000380741
Brassica oleracea C5 6 CH_bol_627 3 6 0.000104901
Corylus avellana 7 6 CH_cav_647 2 2 0.000230008
Gossypium hirsutum A02 6 CH_ghi_646 4 11 0.00000365503
Gossypium raimondii Chr05 6 CH_gra_160 6 16 0.000000000154351
Prunus persica Pp01 6 CH_ppe_256 4 4 0.00000000226669
Quercus lobata 6 6 CH_qlo_352 6 6 0.000000000000189532
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_97 6 13 0.000000000105647

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001