Functional clusters
Information
- Type InterPro
- Description Lipase, eukaryotic
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.06 | 5 | CH_arhy_682 | 3 | 4 | 0.00000301114 |
| Coffea canephora | chr2 | 5 | CH_ccan_558 | 2 | 4 | 0.000255531 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_725 | 2 | 2 | 0.000492187 |
| Carica papaya | supercontig_132 | 5 | CH_cpa_122 | 3 | 3 | 0.0000000542279 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_1358 | 2 | 2 | 0.000585274 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_1073 | 2 | 2 | 0.000359324 |
| Manihot esculenta | Chromosome12 | 5 | CH_mes_307 | 3 | 3 | 0.000000195763 |
| Medicago truncatula | chr6 | 5 | CH_mtr_656 | 3 | 3 | 0.000000724204 |
| Medicago truncatula | chr3 | 5 | CH_mtr_878 | 3 | 7 | 0.0000253294 |
| Punica granatum | NC_045130.1 | 5 | CH_pgr_210 | 3 | 3 | 0.0000000844584 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_683 | 2 | 2 | 0.000734727 |
| Quercus lobata | 8 | 5 | CH_qlo_808 | 3 | 3 | 0.000000139945 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 5 | CH_rch_348 | 4 | 4 | 0.000000000135905 |
| Salix brachista | GWHAAZH00000014 | 5 | CH_sbr_542 | 2 | 2 | 0.000189042 |
| Sechium edule | LG08 | 5 | CH_sed_505 | 2 | 2 | 0.000713419 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.06 | 6 | CH_arhy_682 | 3 | 4 | 0.00000301114 |
| Coffea canephora | chr2 | 6 | CH_ccan_558 | 2 | 4 | 0.000255531 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_725 | 2 | 2 | 0.000492187 |
| Carica papaya | supercontig_132 | 6 | CH_cpa_122 | 3 | 3 | 0.0000000542279 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_1358 | 2 | 2 | 0.000585274 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_1073 | 2 | 2 | 0.000359324 |
| Manihot esculenta | Chromosome12 | 6 | CH_mes_307 | 3 | 3 | 0.000000195763 |
| Medicago truncatula | chr6 | 6 | CH_mtr_656 | 3 | 3 | 0.000000724204 |
| Medicago truncatula | chr3 | 6 | CH_mtr_878 | 3 | 7 | 0.0000253294 |
| Punica granatum | NC_045130.1 | 6 | CH_pgr_210 | 3 | 3 | 0.0000000844584 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_683 | 2 | 2 | 0.000734727 |
| Quercus lobata | 8 | 6 | CH_qlo_808 | 3 | 3 | 0.000000139945 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 6 | CH_rch_348 | 4 | 4 | 0.000000000135905 |
| Salix brachista | GWHAAZH00000014 | 6 | CH_sbr_542 | 2 | 2 | 0.000189042 |
| Sechium edule | LG08 | 6 | CH_sed_505 | 2 | 2 | 0.000713419 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |