Functional clusters
Information
- Type InterPro
- Description Protein NO VEIN, C-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-9 | 5 | CH_aar_373 | 2 | 4 | 0.000547345 |
| Acer truncatum | chr4 | 5 | CH_acertr_296 | 3 | 6 | 0.000000149084 |
| Carya illinoinensis | Chr01 | 5 | CH_cil_732 | 2 | 4 | 0.000371874 |
| Chlamydomonas reinhardtii | chromosome_14 | 5 | CH_cre_190 | 2 | 2 | 0.0006824 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 5 | CH_eca_240 | 3 | 4 | 0.0000000483236 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_188 | 7 | 19 | 1.27565e-18 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_665 | 2 | 2 | 0.000436888 |
| Fragaria vesca | Fvb4 | 5 | CH_fve_398 | 3 | 8 | 0.00000116579 |
| Hydrangea macrophylla | Hma1.2p1_0383F.1 | 5 | CH_hma_236 | 3 | 21 | 0.0000245954 |
| Lonicera japonica | GWHAAZE00000006 | 5 | CH_lonja_96 | 8 | 37 | 3.35917e-20 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 5 | CH_lsa_614 | 2 | 2 | 0.0000514007 |
| Malus domestica | Chr04 | 5 | CH_mdo_348 | 3 | 4 | 0.00000000862809 |
| Prunus persica | Pp01 | 5 | CH_ppe_664 | 2 | 3 | 0.00022378 |
| Papaver somniferum | NC_039362.1 | 5 | CH_pso_1132 | 2 | 3 | 0.000405518 |
| Quercus lobata | 5 | 5 | CH_qlo_553 | 4 | 15 | 0.000000000563433 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_1138 | 2 | 2 | 0.000119596 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1787 | 2 | 2 | 0.0000487151 |
| Trochodendron aralioides | group16 | 5 | CH_tar_104 | 4 | 7 | 0.0000000000227216 |
| Aethionema arabicum | LG-9 | 6 | CH_aar_373 | 2 | 4 | 0.000547345 |
| Acer truncatum | chr4 | 6 | CH_acertr_296 | 3 | 6 | 0.000000149084 |
| Carya illinoinensis | Chr01 | 6 | CH_cil_732 | 2 | 4 | 0.000371874 |
| Chlamydomonas reinhardtii | chromosome_14 | 6 | CH_cre_190 | 2 | 2 | 0.0006824 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 6 | CH_eca_240 | 3 | 4 | 0.0000000483236 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_188 | 7 | 19 | 1.27565e-18 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_665 | 2 | 2 | 0.000436888 |
| Fragaria vesca | Fvb4 | 6 | CH_fve_398 | 3 | 8 | 0.00000116579 |
| Hydrangea macrophylla | Hma1.2p1_0383F.1 | 6 | CH_hma_236 | 3 | 21 | 0.0000245954 |
| Lonicera japonica | GWHAAZE00000006 | 6 | CH_lonja_96 | 8 | 37 | 3.35917e-20 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 6 | CH_lsa_614 | 2 | 2 | 0.0000514007 |
| Malus domestica | Chr04 | 6 | CH_mdo_348 | 3 | 4 | 0.00000000862809 |
| Prunus persica | Pp01 | 6 | CH_ppe_664 | 2 | 3 | 0.00022378 |
| Papaver somniferum | NC_039362.1 | 6 | CH_pso_1132 | 2 | 3 | 0.000405518 |
| Quercus lobata | 5 | 6 | CH_qlo_553 | 4 | 15 | 0.000000000563433 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_1138 | 2 | 2 | 0.000119596 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1787 | 2 | 2 | 0.0000487151 |
| Trochodendron aralioides | group16 | 6 | CH_tar_104 | 4 | 7 | 0.0000000000227216 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |