Functional clusters

Information

  • Type InterPro
  • Description Cysteinyl-tRNA synthetase/mycothiol ligase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group4 5 CH_ach_461 2 2 0.000325928
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 5 CH_amhyb_328 2 2 0.000252525
Aquilegia oxysepala CHR06 5 CH_aox_144 4 20 0.000000112289
Amborella trichopoda AmTr_v1.0_scaffold00033 5 CH_atr_506 2 2 0.000238322
Camellia sinensis var. sinensis Chr10 5 CH_camsi_811 3 14 0.0000114735
Capsicum annuum PGAv.1.6.scaffold322 5 CH_can_790 2 2 0.000495663
Cardamine hirsuta Chr4 5 CH_chi_790 2 2 0.000691204
Capsella rubella scaffold_7 5 CH_cru_264 3 3 0.000000280668
Daucus carota DCARv2_Chr7 5 CH_dca_539 2 2 0.000191333
Fragaria vesca Fvb3 5 CH_fve_331 3 3 0.000000182202
Helianthus annuus HanXRQChr03 5 CH_han_999 2 2 0.000231857
Magnolia biondii Chr07 5 CH_mbi_524 3 7 0.00000123803
Sequoiadendron giganteum chr8 5 CH_sgi_2288 2 2 0.000292291
Sequoiadendron giganteum chr3 5 CH_sgi_2289 2 2 0.000292291
Trifolium pratense Tp57577_TGAC_v2_LG1 5 CH_tpr_610 2 2 0.000227092
Vanilla planifolia CM028159.1 5 CH_vpl_272 3 12 0.00000720253
Actinidia chinensis Lachesis_group4 6 CH_ach_461 2 2 0.000325928
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 6 CH_amhyb_328 2 2 0.000252525
Aquilegia oxysepala CHR06 6 CH_aox_144 4 20 0.000000112289
Amborella trichopoda AmTr_v1.0_scaffold00033 6 CH_atr_506 2 2 0.000238322
Camellia sinensis var. sinensis Chr10 6 CH_camsi_811 3 14 0.0000114735
Capsicum annuum PGAv.1.6.scaffold322 6 CH_can_790 2 2 0.000495663
Cardamine hirsuta Chr4 6 CH_chi_790 2 2 0.000691204
Capsella rubella scaffold_7 6 CH_cru_264 3 3 0.000000280668
Daucus carota DCARv2_Chr7 6 CH_dca_539 2 2 0.000191333
Fragaria vesca Fvb3 6 CH_fve_331 3 3 0.000000182202
Helianthus annuus HanXRQChr03 6 CH_han_999 2 2 0.000231857
Magnolia biondii Chr07 6 CH_mbi_524 3 7 0.00000123803
Sequoiadendron giganteum chr8 6 CH_sgi_2288 2 2 0.000292291
Sequoiadendron giganteum chr3 6 CH_sgi_2289 2 2 0.000292291
Trifolium pratense Tp57577_TGAC_v2_LG1 6 CH_tpr_610 2 2 0.000227092
Vanilla planifolia CM028159.1 6 CH_vpl_272 3 12 0.00000720253

Available child term results

Ontology identifier Description Number of clusters
IPR015803 Cysteine-tRNA ligase 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001