Functional clusters

Information

  • Type InterPro
  • Description Nuclear factor related to kappa-B-binding protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus A03 5 CH_bna_1364 2 2 0.000519726
Camellia sinensis var. sinensis Chr2 5 CH_camsi_1351 2 2 0.000458547
Corylus avellana 6 5 CH_cav_645 2 2 0.000230008
Coffea canephora chr7 5 CH_ccan_158 3 11 0.0000000448905
Ceratophyllum demersum 1 5 CH_cde_521 2 2 0.000789796
Daucus carota DCARv2_Chr5 5 CH_dca_538 2 2 0.000191333
Fragaria vesca Fvb6 5 CH_fve_719 2 2 0.000353461
Gossypium hirsutum A11 5 CH_ghi_560 3 3 0.000000727242
Lonicera japonica GWHAAZE00000007 5 CH_lonja_1168 2 2 0.000598874
Petunia axillaris Peaxi162Scf00420 5 CH_pax_555 2 2 0.000211067
Physcomitrium patens Chr14 5 CH_ppa_259 2 2 0.000183818
Sapria himalayana scaffold16_12220143 5 CH_shi_117 3 3 0.0000000196182
Solanum lycopersicum SL4.0ch02 5 CH_sly_726 2 2 0.000176082
Solanum pennellii Spenn-ch10 5 CH_spe_126 4 4 0.0000000000871225
Solanum pennellii Spenn-ch06 5 CH_spe_79 5 6 0.0000000000000813722
Utricularia gibba unitig_736 5 CH_ugi_328 2 2 0.000492287
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_715 2 2 0.000557543
Vitis vinifera chr7 5 CH_vvi_316 3 4 0.000000347115
Brassica napus A03 6 CH_bna_1364 2 2 0.000519726
Camellia sinensis var. sinensis Chr2 6 CH_camsi_1351 2 2 0.000458547
Corylus avellana 6 6 CH_cav_645 2 2 0.000230008
Coffea canephora chr7 6 CH_ccan_158 3 11 0.0000000448905
Ceratophyllum demersum 1 6 CH_cde_521 2 2 0.000789796
Daucus carota DCARv2_Chr5 6 CH_dca_538 2 2 0.000191333
Fragaria vesca Fvb6 6 CH_fve_719 2 2 0.000353461
Gossypium hirsutum A11 6 CH_ghi_560 3 3 0.000000727242
Lonicera japonica GWHAAZE00000007 6 CH_lonja_1168 2 2 0.000598874
Petunia axillaris Peaxi162Scf00420 6 CH_pax_555 2 2 0.000211067
Physcomitrium patens Chr14 6 CH_ppa_259 2 2 0.000183818
Sapria himalayana scaffold16_12220143 6 CH_shi_117 3 3 0.0000000196182
Solanum lycopersicum SL4.0ch02 6 CH_sly_726 2 2 0.000176082
Solanum pennellii Spenn-ch10 6 CH_spe_126 4 4 0.0000000000871225
Solanum pennellii Spenn-ch06 6 CH_spe_79 5 6 0.0000000000000813722
Utricularia gibba unitig_736 6 CH_ugi_328 2 2 0.000492287
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_715 2 2 0.000557543
Vitis vinifera chr7 6 CH_vvi_316 3 4 0.000000347115

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001