Functional clusters
Information
- Type InterPro
- Description Catalase, mono-functional, haem-containing, clades 1 and 3
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_1 | 5 | CH_aly_514 | 2 | 2 | 0.000198013 |
| Avicennia marina | ScioBoG_3008_HRSCAF_3015 | 5 | CH_ama_154 | 2 | 2 | 0.000258665 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 5 | CH_arhy_1062 | 2 | 3 | 0.000269438 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_417 | 2 | 2 | 0.0000859476 |
| Amborella trichopoda | AmTr_v1.0_scaffold00001 | 5 | CH_atr_365 | 2 | 2 | 0.0000794407 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 5 | CH_bvu_458 | 2 | 4 | 0.000496709 |
| Camellia sinensis var. sinensis | Chr4 | 5 | CH_camsi_643 | 3 | 7 | 0.00000110367 |
| Cannabis sativa | NC_044370.1 | 5 | CH_cansat_451 | 2 | 2 | 0.000196993 |
| Coffea canephora | chr7 | 5 | CH_ccan_440 | 2 | 3 | 0.00007666 |
| Coffea canephora | chr10 | 5 | CH_ccan_552 | 2 | 7 | 0.000255531 |
| Citrus clementina | scaffold_5 | 5 | CH_ccl_514 | 2 | 2 | 0.0000820311 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_591 | 2 | 2 | 0.000207361 |
| Carya illinoinensis | Chr07 | 5 | CH_cil_778 | 2 | 3 | 0.000557817 |
| Capsella rubella | scaffold_1 | 5 | CH_cru_524 | 2 | 2 | 0.000219346 |
| Cucumis sativus L. | chr4 | 5 | CH_csa_392 | 2 | 2 | 0.000250428 |
| Daucus carota | DCARv2_Chr5 | 5 | CH_dca_736 | 2 | 2 | 0.000956663 |
| Daucus carota | DCARv2_Chr4 | 5 | CH_dca_737 | 2 | 2 | 0.000956663 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 5 | CH_eca_519 | 2 | 2 | 0.0000448722 |
| Eucalyptus grandis | Chr06 | 5 | CH_egr_641 | 3 | 3 | 0.0000000205534 |
| Helianthus annuus | HanXRQChr08 | 5 | CH_han_1120 | 2 | 2 | 0.000579643 |
| Lonicera japonica | GWHAAZE00000004 | 5 | CH_lonja_1035 | 2 | 2 | 0.000359324 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 5 | CH_lsa_602 | 2 | 2 | 0.0000514007 |
| Malus domestica | Chr06 | 5 | CH_mdo_387 | 3 | 5 | 0.0000000215698 |
| Manihot esculenta | Chromosome05 | 5 | CH_mes_670 | 2 | 2 | 0.000610631 |
| Manihot esculenta | Chromosome18 | 5 | CH_mes_671 | 2 | 2 | 0.000610631 |
| Punica granatum | NC_045133.1 | 5 | CH_pgr_491 | 2 | 2 | 0.000225107 |
| Prunus persica | Pp05 | 5 | CH_ppe_581 | 2 | 2 | 0.0000745962 |
| Quercus lobata | CM012294 | 5 | CH_qlo_1223 | 2 | 2 | 0.0000516289 |
| Schrenkiella parvula | ch1-1 | 5 | CH_spa_280 | 2 | 2 | 0.000236202 |
| Tarenaya hassleriana | NW_010965372.1 | 5 | CH_tha_331 | 2 | 2 | 0.00069847 |
| Arabidopsis lyrata | scaffold_1 | 6 | CH_aly_514 | 2 | 2 | 0.000198013 |
| Avicennia marina | ScioBoG_3008_HRSCAF_3015 | 6 | CH_ama_154 | 2 | 2 | 0.000258665 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 6 | CH_arhy_1062 | 2 | 3 | 0.000269438 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_417 | 2 | 2 | 0.0000859476 |
| Amborella trichopoda | AmTr_v1.0_scaffold00001 | 6 | CH_atr_365 | 2 | 2 | 0.0000794407 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 6 | CH_bvu_458 | 2 | 4 | 0.000496709 |
| Camellia sinensis var. sinensis | Chr4 | 6 | CH_camsi_643 | 3 | 7 | 0.00000110367 |
| Cannabis sativa | NC_044370.1 | 6 | CH_cansat_451 | 2 | 2 | 0.000196993 |
| Coffea canephora | chr7 | 6 | CH_ccan_440 | 2 | 3 | 0.00007666 |
| Coffea canephora | chr10 | 6 | CH_ccan_552 | 2 | 7 | 0.000255531 |
| Citrus clementina | scaffold_5 | 6 | CH_ccl_514 | 2 | 2 | 0.0000820311 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_591 | 2 | 2 | 0.000207361 |
| Carya illinoinensis | Chr07 | 6 | CH_cil_778 | 2 | 3 | 0.000557817 |
| Cucumis melo | chr07 | 6 | CH_cme_355 | 2 | 2 | 0.000200133 |
| Capsella rubella | scaffold_1 | 6 | CH_cru_524 | 2 | 2 | 0.000219346 |
| Cucumis sativus L. | chr4 | 6 | CH_csa_392 | 2 | 2 | 0.000250428 |
| Daucus carota | DCARv2_Chr5 | 6 | CH_dca_736 | 2 | 2 | 0.000956663 |
| Daucus carota | DCARv2_Chr4 | 6 | CH_dca_737 | 2 | 2 | 0.000956663 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 6 | CH_eca_519 | 2 | 2 | 0.0000448722 |
| Eucalyptus grandis | Chr06 | 6 | CH_egr_641 | 3 | 3 | 0.0000000205534 |
| Helianthus annuus | HanXRQChr08 | 6 | CH_han_1120 | 2 | 2 | 0.000579643 |
| Lonicera japonica | GWHAAZE00000004 | 6 | CH_lonja_1035 | 2 | 2 | 0.000359324 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 6 | CH_lsa_602 | 2 | 2 | 0.0000514007 |
| Malus domestica | Chr06 | 6 | CH_mdo_387 | 3 | 5 | 0.0000000215698 |
| Manihot esculenta | Chromosome05 | 6 | CH_mes_670 | 2 | 2 | 0.000610631 |
| Manihot esculenta | Chromosome18 | 6 | CH_mes_671 | 2 | 2 | 0.000610631 |
| Punica granatum | NC_045133.1 | 6 | CH_pgr_491 | 2 | 2 | 0.000225107 |
| Prunus persica | Pp05 | 6 | CH_ppe_581 | 2 | 2 | 0.0000745962 |
| Quercus lobata | CM012294 | 6 | CH_qlo_1223 | 2 | 2 | 0.0000516289 |
| Schrenkiella parvula | ch1-1 | 6 | CH_spa_280 | 2 | 2 | 0.000236202 |
| Tarenaya hassleriana | NW_010965372.1 | 6 | CH_tha_331 | 2 | 2 | 0.00069847 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |