Functional clusters

Information

  • Type InterPro
  • Description Staygreen protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 5 CH_aly_612 2 2 0.000396027
Arabidopsis thaliana Chr4 5 CH_ath_475 2 2 0.000171895
Cardamine hirsuta Chr8 5 CH_chi_718 2 2 0.000414723
Capsella rubella scaffold_6 5 CH_cru_599 2 2 0.000438693
Eutrema salsugineum scaffold_3 5 CH_esa_463 2 2 0.000456899
Glycine max Gm17 5 CH_gma_879 2 2 0.000569336
Nicotiana tabacum Nitab4.5_0001714 5 CH_nta_273 2 2 0.000329182
Papaver somniferum NC_039365.1 5 CH_pso_1095 2 2 0.000337941
Salix brachista GWHAAZH00000003 5 CH_sbr_603 2 2 0.000378084
Sequoiadendron giganteum chr4 5 CH_sgi_2287 2 2 0.000292291
Solanum tuberosum ST4.03ch12 5 CH_stu_788 2 2 0.000307472
Vitis vinifera chr2 5 CH_vvi_699 2 2 0.000456378
Arabidopsis lyrata scaffold_6 6 CH_aly_612 2 2 0.000396027
Arabidopsis thaliana Chr4 6 CH_ath_475 2 2 0.000171895
Cardamine hirsuta Chr8 6 CH_chi_718 2 2 0.000414723
Capsella rubella scaffold_6 6 CH_cru_599 2 2 0.000438693
Eutrema salsugineum scaffold_3 6 CH_esa_463 2 2 0.000456899
Glycine max Gm17 6 CH_gma_879 2 2 0.000569336
Nicotiana tabacum Nitab4.5_0001714 6 CH_nta_273 2 2 0.000329182
Papaver somniferum NC_039365.1 6 CH_pso_1095 2 2 0.000337941
Salix brachista GWHAAZH00000003 6 CH_sbr_603 2 2 0.000378084
Sequoiadendron giganteum chr4 6 CH_sgi_2287 2 2 0.000292291
Solanum tuberosum ST4.03ch12 6 CH_stu_788 2 2 0.000307472
Vitis vinifera chr2 6 CH_vvi_699 2 2 0.000456378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001