Functional clusters
Information
- Type InterPro
- Description Ammonium transporter AmtB-like domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-8 | 5 | CH_aar_167 | 3 | 3 | 0.000000436997 |
| Acer truncatum | chr2 | 5 | CH_acertr_380 | 3 | 3 | 0.0000016401 |
| Chara braunii | BFEA01000437 | 5 | CH_cbr_50 | 5 | 15 | 0.00000000180457 |
| Coffea canephora | chr6 | 5 | CH_ccan_547 | 2 | 2 | 0.00023424 |
| Carica papaya | supercontig_6 | 5 | CH_cpa_667 | 2 | 2 | 0.000950661 |
| Davidia involucrata | GWHABJS00000015 | 5 | CH_din_301 | 3 | 3 | 0.000000825433 |
| Magnolia biondii | Chr01 | 5 | CH_mbi_643 | 3 | 5 | 0.0000101147 |
| Petunia axillaris | Peaxi162Scf00341 | 5 | CH_pax_262 | 3 | 3 | 0.000000891016 |
| Prunus persica | Pp04 | 5 | CH_ppe_161 | 6 | 16 | 0.00000000000207704 |
| Populus trichocarpa | Chr19 | 5 | CH_ptr_334 | 4 | 8 | 0.000000242312 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 5 | CH_rch_399 | 4 | 5 | 0.000000000951168 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1277 | 3 | 3 | 0.00000101811 |
| Trochodendron aralioides | group4 | 5 | CH_tar_398 | 3 | 3 | 0.00000523915 |
| Vanilla planifolia | CM028152.1 | 5 | CH_vpl_718 | 2 | 2 | 0.00073888 |
| Aethionema arabicum | LG-8 | 6 | CH_aar_167 | 3 | 3 | 0.000000436997 |
| Acer truncatum | chr2 | 6 | CH_acertr_380 | 3 | 3 | 0.0000016401 |
| Chara braunii | BFEA01000437 | 6 | CH_cbr_50 | 5 | 15 | 0.00000000180457 |
| Coffea canephora | chr6 | 6 | CH_ccan_547 | 2 | 2 | 0.00023424 |
| Carica papaya | supercontig_6 | 6 | CH_cpa_667 | 2 | 2 | 0.000950661 |
| Davidia involucrata | GWHABJS00000015 | 6 | CH_din_301 | 3 | 3 | 0.000000825433 |
| Fragaria x ananassa | Fvb6-1 | 6 | CH_fan_134 | 5 | 8 | 0.0000000000138291 |
| Magnolia biondii | Chr01 | 6 | CH_mbi_643 | 3 | 5 | 0.0000101147 |
| Petunia axillaris | Peaxi162Scf00341 | 6 | CH_pax_262 | 3 | 3 | 0.000000891016 |
| Prunus persica | Pp04 | 6 | CH_ppe_161 | 6 | 16 | 0.00000000000207704 |
| Populus trichocarpa | Chr19 | 6 | CH_ptr_334 | 4 | 8 | 0.000000242312 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 6 | CH_rch_399 | 4 | 5 | 0.000000000951168 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1277 | 3 | 3 | 0.00000101811 |
| Trochodendron aralioides | group4 | 6 | CH_tar_398 | 3 | 3 | 0.00000523915 |
| Vanilla planifolia | CM028152.1 | 6 | CH_vpl_718 | 2 | 2 | 0.00073888 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |