Functional clusters

Information

  • Type InterPro
  • Description Glycoside hydrolase, family 2, beta-galactosidase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 5 CH_acertr_550 2 2 0.000070497
Citrus clementina scaffold_8 5 CH_ccl_603 2 3 0.000246083
Malus domestica Chr07 5 CH_mdo_349 3 3 0.00000000862825
Prunus persica Pp02 5 CH_ppe_661 2 3 0.00022378
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1371 2 6 0.000597931
Sequoiadendron giganteum chr2 5 CH_sgi_763 3 3 0.00000000355983
Trochodendron aralioides group1 5 CH_tar_269 3 7 0.000000189214
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_423 2 2 0.0000929238
Acer truncatum chr12 6 CH_acertr_550 2 2 0.000070497
Citrus clementina scaffold_8 6 CH_ccl_603 2 3 0.000246083
Fragaria x ananassa Fvb7-1 6 CH_fan_987 2 3 0.000333058
Malus domestica Chr07 6 CH_mdo_349 3 3 0.00000000862825
Prunus persica Pp02 6 CH_ppe_661 2 3 0.00022378
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1371 2 6 0.000597931
Sequoiadendron giganteum chr2 6 CH_sgi_763 3 3 0.00000000355983
Trochodendron aralioides group1 6 CH_tar_269 3 7 0.000000189214
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_423 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001