Functional clusters
Information
- Type InterPro
- Description Serpin domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_247 | 3 | 3 | 0.000000352118 |
| Brassica napus | C08 | 5 | CH_bna_186 | 5 | 8 | 0.0000000000373317 |
| Brassica oleracea | C8 | 5 | CH_bol_446 | 3 | 4 | 0.0000113499 |
| Brassica rapa | A09 | 5 | CH_bra_264 | 3 | 4 | 0.00000503069 |
| Cardamine hirsuta | Chr2 | 5 | CH_chi_318 | 5 | 45 | 0.00000062017 |
| Cardamine hirsuta | Chr4 | 5 | CH_chi_360 | 3 | 3 | 0.00000326085 |
| Davidia involucrata | GWHABJS00000011 | 5 | CH_din_132 | 4 | 5 | 0.0000000000281464 |
| Medicago truncatula | chr3 | 5 | CH_mtr_25 | 14 | 19 | 1.35058e-35 |
| Nicotiana tabacum | Nitab4.5_0000068 | 5 | CH_nta_3 | 9 | 18 | 1.44916e-23 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_11 | 15 | 41 | 3.51689e-31 |
| Rhododendron simsii | chr06 | 5 | CH_rsi_39 | 13 | 26 | 2.08385e-27 |
| Salix brachista | GWHAAZH00000017 | 5 | CH_sbr_541 | 2 | 2 | 0.000189042 |
| Trochodendron aralioides | group5 | 5 | CH_tar_36 | 6 | 8 | 3.44034e-18 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_135 | 4 | 4 | 0.00000000177642 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_247 | 3 | 3 | 0.000000352118 |
| Brassica napus | C08 | 6 | CH_bna_186 | 5 | 8 | 0.0000000000373317 |
| Brassica oleracea | C8 | 6 | CH_bol_446 | 3 | 4 | 0.0000113499 |
| Brassica rapa | A09 | 6 | CH_bra_264 | 3 | 4 | 0.00000503069 |
| Cardamine hirsuta | Chr2 | 6 | CH_chi_318 | 5 | 45 | 0.00000062017 |
| Cardamine hirsuta | Chr4 | 6 | CH_chi_360 | 3 | 3 | 0.00000326085 |
| Davidia involucrata | GWHABJS00000011 | 6 | CH_din_132 | 4 | 5 | 0.0000000000281464 |
| Medicago truncatula | chr3 | 6 | CH_mtr_25 | 14 | 19 | 1.35058e-35 |
| Nicotiana tabacum | Nitab4.5_0000068 | 6 | CH_nta_3 | 9 | 18 | 1.44916e-23 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_11 | 15 | 41 | 3.51689e-31 |
| Rhododendron simsii | chr06 | 6 | CH_rsi_39 | 13 | 26 | 2.08385e-27 |
| Salix brachista | GWHAAZH00000017 | 6 | CH_sbr_541 | 2 | 2 | 0.000189042 |
| Trochodendron aralioides | group5 | 6 | CH_tar_36 | 6 | 8 | 3.44034e-18 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_135 | 4 | 4 | 0.00000000177642 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |