Functional clusters
Information
- Type InterPro
- Description Chlorophyll a/b binding domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Fragaria vesca | Fvb2 | 5 | CH_fve_661 | 3 | 5 | 0.000189989 |
| Glycine max | Gm16 | 5 | CH_gma_771 | 4 | 23 | 0.000255817 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_241 | 7 | 22 | 0.00000000000630409 |
| Marchantia polymorpha | scaffold_50 | 5 | CH_mpo_172 | 3 | 3 | 0.000225807 |
| Marchantia polymorpha | scaffold_91 | 5 | CH_mpo_82 | 4 | 4 | 0.000000498827 |
| Physcomitrium patens | Chr03 | 5 | CH_ppa_108 | 4 | 6 | 0.0000132346 |
| Physcomitrium patens | Chr04 | 5 | CH_ppa_192 | 6 | 53 | 0.0000893475 |
| Fragaria x ananassa | Fvb2-2 | 6 | CH_fan_978 | 3 | 4 | 0.000302689 |
| Fragaria vesca | Fvb2 | 6 | CH_fve_661 | 3 | 5 | 0.000189989 |
| Glycine max | Gm16 | 6 | CH_gma_771 | 4 | 23 | 0.000255817 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_241 | 7 | 22 | 0.00000000000630409 |
| Marchantia polymorpha | scaffold_50 | 6 | CH_mpo_172 | 3 | 3 | 0.000225807 |
| Marchantia polymorpha | scaffold_91 | 6 | CH_mpo_82 | 4 | 4 | 0.000000498827 |
| Physcomitrium patens | Chr03 | 6 | CH_ppa_108 | 4 | 6 | 0.0000132346 |
| Physcomitrium patens | Chr04 | 6 | CH_ppa_192 | 6 | 53 | 0.0000893475 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |