Functional clusters

Information

  • Type InterPro
  • Description P-type ATPase, cytoplasmic domain N

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 5 CH_acertr_513 4 12 0.0000522415
Brassica napus A01 5 CH_bna_1292 5 35 0.000379686
Brassica oleracea C1 5 CH_bol_809 5 44 0.000570273
Brassica rapa A01 5 CH_bra_441 5 37 0.000224727
Cardamine hirsuta Chr8 5 CH_chi_561 3 3 0.000123955
Chenopodium quinoa C_Quinoa_Scaffold_3489 5 CH_cqu_396 4 4 0.000000710396
Gossypium hirsutum A09 5 CH_ghi_1091 3 3 0.000348114
Gossypium raimondii Chr06 5 CH_gra_527 3 3 0.000163052
Lonicera japonica GWHAAZE00000009 5 CH_lonja_509 7 52 0.000000662516
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_62 13 35 8.98285e-25
Sequoiadendron giganteum chr1 5 CH_sgi_1900 3 3 0.0000655864
Solanum tuberosum ST4.03ch02 5 CH_stu_550 3 3 0.0000360005
Acer truncatum chr2 6 CH_acertr_513 4 12 0.0000522415
Brassica napus A01 6 CH_bna_1292 5 35 0.000379686
Brassica oleracea C1 6 CH_bol_809 5 44 0.000570273
Brassica rapa A01 6 CH_bra_441 5 37 0.000224727
Cardamine hirsuta Chr8 6 CH_chi_561 3 3 0.000123955
Chenopodium quinoa C_Quinoa_Scaffold_3489 6 CH_cqu_396 4 4 0.000000710396
Gossypium hirsutum A09 6 CH_ghi_1091 3 3 0.000348114
Gossypium raimondii Chr06 6 CH_gra_527 3 3 0.000163052
Lonicera japonica GWHAAZE00000009 6 CH_lonja_509 7 52 0.000000662516
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_62 13 35 8.98285e-25
Sequoiadendron giganteum chr1 6 CH_sgi_1900 3 3 0.0000655864
Solanum tuberosum ST4.03ch02 6 CH_stu_550 3 3 0.0000360005

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001