Functional clusters
Information
- Type InterPro
- Description Phenylalanine ammonia-lyase, shielding domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsicum annuum | PGAv.1.6.scaffold363 | 5 | CH_can_125 | 5 | 8 | 0.000000000000410746 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_290 | 3 | 4 | 0.00000137124 |
| Solanum lycopersicum | SL4.0ch09 | 5 | CH_sly_160 | 4 | 5 | 0.0000000000424659 |
| Solanum tuberosum | ST4.03ch09 | 5 | CH_stu_189 | 4 | 4 | 0.0000000000508729 |
| Vigna mungo | CM024071.1 | 5 | CH_vmu_535 | 2 | 2 | 0.000387685 |
| Zea mays | 5 | 5 | CH_zma_210 | 3 | 5 | 0.000000878357 |
| Capsicum annuum | PGAv.1.6.scaffold363 | 6 | CH_can_125 | 5 | 8 | 0.000000000000410746 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_290 | 3 | 4 | 0.00000137124 |
| Solanum lycopersicum | SL4.0ch09 | 6 | CH_sly_160 | 4 | 5 | 0.0000000000424659 |
| Solanum tuberosum | ST4.03ch09 | 6 | CH_stu_189 | 4 | 4 | 0.0000000000508729 |
| Vigna mungo | CM024071.1 | 6 | CH_vmu_535 | 2 | 2 | 0.000387685 |
| Zea mays | 5 | 6 | CH_zma_210 | 3 | 5 | 0.000000878357 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |