Functional clusters

Information

  • Type InterPro
  • Description Signal recognition particle, SRP54 subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group27 5 CH_ach_528 2 2 0.000543213
Actinidia chinensis Lachesis_group1 5 CH_ach_529 2 2 0.000543213
Capsicum annuum PGAv.1.6.scaffold407 5 CH_can_852 2 2 0.000826105
Magnolia biondii Chr04 5 CH_mbi_1038 2 2 0.000291397
Malus domestica Chr17 5 CH_mdo_1315 2 2 0.000568817
Medicago truncatula chr4 5 CH_mtr_1351 2 2 0.000616295
Nicotiana tabacum Nitab4.5_0000373 5 CH_nta_272 2 2 0.000329182
Olea europaea scaffold1152 5 CH_oeu_75 4 7 0.000000000558833
Petunia axillaris Peaxi162Scf00105 5 CH_pax_639 2 2 0.000422134
Quercus lobata 4 5 CH_qlo_1716 2 2 0.000516289
Rhododendron simsii chr04 5 CH_rsi_975 2 2 0.000645307
Sequoiadendron giganteum chr3 5 CH_sgi_618 4 4 0.0000000000437034
Sapria himalayana scaffold11_13529635 5 CH_shi_88 3 3 0.00000000490454
Trochodendron aralioides group1 5 CH_tar_892 2 2 0.000600366
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_80 5 8 0.00000000000394446
Actinidia chinensis Lachesis_group27 6 CH_ach_528 2 2 0.000543213
Actinidia chinensis Lachesis_group1 6 CH_ach_529 2 2 0.000543213
Capsicum annuum PGAv.1.6.scaffold407 6 CH_can_852 2 2 0.000826105
Magnolia biondii Chr04 6 CH_mbi_1038 2 2 0.000291397
Malus domestica Chr17 6 CH_mdo_1315 2 2 0.000568817
Medicago truncatula chr4 6 CH_mtr_1351 2 2 0.000616295
Nicotiana tabacum Nitab4.5_0000373 6 CH_nta_272 2 2 0.000329182
Olea europaea scaffold1152 6 CH_oeu_75 4 7 0.000000000558833
Petunia axillaris Peaxi162Scf00105 6 CH_pax_639 2 2 0.000422134
Quercus lobata 4 6 CH_qlo_1716 2 2 0.000516289
Rhododendron simsii chr04 6 CH_rsi_975 2 2 0.000645307
Sequoiadendron giganteum chr3 6 CH_sgi_618 4 4 0.0000000000437034
Sapria himalayana scaffold11_13529635 6 CH_shi_88 3 3 0.00000000490454
Trochodendron aralioides group1 6 CH_tar_892 2 2 0.000600366
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_80 5 8 0.00000000000394446

Available child term results

Ontology identifier Description Number of clusters
IPR006325 Signal recognition particle, SRP54 subunit, eukaryotic 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001