Functional clusters

Information

  • Type InterPro
  • Description Condensin complex subunit 2/barren

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group15 5 CH_ach_367 2 2 0.000162964
Brassica carinata ChrB06 5 CH_bca_1443 2 2 0.000128259
Brassica napus C04 5 CH_bna_1149 2 2 0.000185617
Capsicum annuum PGAv.1.6.scaffold574 5 CH_can_705 2 2 0.000247831
Chenopodium quinoa C_Quinoa_Scaffold_1373 5 CH_cqu_1039 2 3 0.000852831
Chenopodium quinoa C_Quinoa_Scaffold_1529 5 CH_cqu_853 2 2 0.000284293
Davidia involucrata GWHABJS00000001 5 CH_din_665 2 2 0.000300075
Lupinus albus Lalb_Chr19 5 CH_lal_526 2 2 0.000157447
Lonicera japonica GWHAAZE00000008 5 CH_lonja_1071 2 2 0.000359324
Lonicera japonica GWHAAZE00000008 5 CH_lonja_1072 2 2 0.000359324
Malus domestica Chr03 5 CH_mdo_1420 2 2 0.000796344
Malus domestica Chr17 5 CH_mdo_507 3 4 0.000000301966
Sequoiadendron giganteum chr3 5 CH_sgi_2285 2 2 0.000292291
Sequoiadendron giganteum chr11 5 CH_sgi_2286 2 2 0.000292291
Sapria himalayana scaffold10_15062905 5 CH_shi_108 3 4 0.0000000196176
Selenicereus undatus Scaffold_33678 5 CH_sun_73 3 4 0.0000000316802
Actinidia chinensis Lachesis_group15 6 CH_ach_367 2 2 0.000162964
Brassica carinata ChrB06 6 CH_bca_1443 2 2 0.000128259
Brassica napus C04 6 CH_bna_1149 2 2 0.000185617
Capsicum annuum PGAv.1.6.scaffold574 6 CH_can_705 2 2 0.000247831
Chenopodium quinoa C_Quinoa_Scaffold_1373 6 CH_cqu_1039 2 3 0.000852831
Chenopodium quinoa C_Quinoa_Scaffold_1529 6 CH_cqu_853 2 2 0.000284293
Davidia involucrata GWHABJS00000001 6 CH_din_665 2 2 0.000300075
Fragaria x ananassa Fvb3-1 6 CH_fan_1178 2 2 0.00066613
Lupinus albus Lalb_Chr19 6 CH_lal_526 2 2 0.000157447
Lonicera japonica GWHAAZE00000008 6 CH_lonja_1071 2 2 0.000359324
Lonicera japonica GWHAAZE00000008 6 CH_lonja_1072 2 2 0.000359324
Malus domestica Chr03 6 CH_mdo_1420 2 2 0.000796344
Malus domestica Chr17 6 CH_mdo_507 3 4 0.000000301966
Sequoiadendron giganteum chr3 6 CH_sgi_2285 2 2 0.000292291
Sequoiadendron giganteum chr11 6 CH_sgi_2286 2 2 0.000292291
Sapria himalayana scaffold10_15062905 6 CH_shi_108 3 4 0.0000000196176
Selenicereus undatus Scaffold_33678 6 CH_sun_73 3 4 0.0000000316802

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001