Functional clusters

Information

  • Type InterPro
  • Description Ribosomal protein S4/S9

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr8 5 CH_ccan_516 2 2 0.000153321
Coffea canephora chr0 5 CH_ccan_517 2 2 0.000153321
Gossypium raimondii Chr07 5 CH_gra_393 3 7 0.0000248789
Helianthus annuus HanXRQChr13 5 CH_han_391 5 25 0.0000000232648
Hydrangea macrophylla Hma1.2p1_0020F.1 5 CH_hma_574 2 2 0.000333259
Pisum sativum chr4LG4 5 CH_psa_740 2 2 0.000782452
Populus trichocarpa Chr06 5 CH_ptr_371 3 3 0.000000826885
Salvia bowleyana GWHASIU00000007 5 CH_sbo_124 6 19 0.0000000000000549144
Coffea canephora chr8 6 CH_ccan_516 2 2 0.000153321
Coffea canephora chr0 6 CH_ccan_517 2 2 0.000153321
Gossypium raimondii Chr07 6 CH_gra_393 3 7 0.0000248789
Helianthus annuus HanXRQChr13 6 CH_han_391 5 25 0.0000000232648
Hydrangea macrophylla Hma1.2p1_0020F.1 6 CH_hma_574 2 2 0.000333259
Pisum sativum chr4LG4 6 CH_psa_740 2 2 0.000782452
Populus trichocarpa Chr06 6 CH_ptr_371 3 3 0.000000826885
Salvia bowleyana GWHASIU00000007 6 CH_sbo_124 6 19 0.0000000000000549144

Available child term results

Ontology identifier Description Number of clusters
IPR005709 Ribosomal protein S4, bacterial-type 4
IPR005710 Ribosomal protein S4/S9, eukaryotic/archaeal 14

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001