Functional clusters
Information
- Type InterPro
- Description Peptidase S54, rhomboid domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_368 | 5 | CH_aag_141 | 3 | 4 | 0.00000463666 |
| Brassica carinata | ChrC08 | 5 | CH_bca_1703 | 3 | 7 | 0.000339948 |
| Fragaria vesca | Fvb5 | 5 | CH_fve_489 | 3 | 4 | 0.0000141549 |
| Magnolia biondii | Chr01 | 5 | CH_mbi_830 | 3 | 9 | 0.000108035 |
| Papaver somniferum | NC_039365.1 | 5 | CH_pso_1179 | 3 | 13 | 0.00056499 |
| Salvia bowleyana | GWHASIU00000005 | 5 | CH_sbo_214 | 4 | 4 | 0.000000000864666 |
| Anthoceros agrestis | Sc2ySwM_368 | 6 | CH_aag_141 | 3 | 4 | 0.00000463666 |
| Brassica carinata | ChrC08 | 6 | CH_bca_1703 | 3 | 7 | 0.000339948 |
| Fragaria x ananassa | Fvb5-2 | 6 | CH_fan_787 | 3 | 4 | 0.0000702704 |
| Fragaria vesca | Fvb5 | 6 | CH_fve_489 | 3 | 4 | 0.0000141549 |
| Magnolia biondii | Chr01 | 6 | CH_mbi_830 | 3 | 9 | 0.000108035 |
| Papaver somniferum | NC_039365.1 | 6 | CH_pso_1179 | 3 | 13 | 0.00056499 |
| Salvia bowleyana | GWHASIU00000005 | 6 | CH_sbo_214 | 4 | 4 | 0.000000000864666 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |