Functional clusters

Information

  • Type InterPro
  • Description Protein of unknown function wound-induced

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_138 4 5 0.00000000036786
Actinidia chinensis Lachesis_group19 5 CH_ach_18 5 5 0.00000000000000822966
Avicennia marina ScioBoG_17730_HRSCAF_17811 5 CH_ama_64 3 4 0.000000892017
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 5 CH_amhyb_29 5 7 0.000000000000166053
Aquilegia oxysepala CHR01 5 CH_aox_401 2 3 0.000240587
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 5 CH_arhy_184 5 6 0.00000000000000911021
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 5 CH_arhy_315 4 5 0.000000000084523
Amborella trichopoda AmTr_v1.0_scaffold00003 5 CH_atr_104 4 8 0.000000000105277
Brassica carinata ChrC08 5 CH_bca_209 5 11 0.000000000047539
Brassica carinata ChrB07 5 CH_bca_457 4 8 0.0000000306432
Brassica napus A09 5 CH_bna_765 3 5 0.00000687169
Brassica napus C06 5 CH_bna_999 3 10 0.0000576911
Brassica oleracea C6 5 CH_bol_530 3 9 0.0000384688
Brassica rapa A09 5 CH_bra_31 6 12 0.0000000000000151613
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_476 2 2 0.00049675
Camellia sinensis var. sinensis Chr5 5 CH_camsi_14 13 36 8.22099e-33
Camellia sinensis var. sinensis Chr7 5 CH_camsi_92 6 6 1.2379e-16
Cannabis sativa NC_044377.1 5 CH_cansat_27 6 7 1.92332e-19
Capsicum annuum PGAv.1.6.scaffold508 5 CH_can_52 8 9 1.8105e-21
Cicer arietinum L. Ca_LG1_v3 5 CH_car_12 5 7 0.000000000000728109
Corylus avellana 4 5 CH_cav_161 4 4 0.00000000135355
Corylus avellana 5 5 CH_cav_30 8 12 7.29048e-21
Coffea canephora chr5 5 CH_ccan_10 6 42 1.38884e-17
Citrus clementina scaffold_2 5 CH_ccl_31 9 11 1.14381e-25
Citrus clementina scaffold_1 5 CH_ccl_572 3 7 0.000100901
Carpinus fangiana Cfa06 5 CH_cfa_13 11 13 2.57997e-32
Carpinus fangiana Cfa08 5 CH_cfa_358 3 4 0.0000156532
Cardamine hirsuta Chr8 5 CH_chi_294 4 16 0.000000377774
Carya illinoinensis Chr03 5 CH_cil_11 12 13 9.77577e-37
Citrullus lanatus CG_Chr02 5 CH_cla_49 4 4 0.00000000026393
Corchorus olitorius AWUE01014241.1 5 CH_col_12 6 7 3.35351e-16
Carica papaya supercontig_12 5 CH_cpa_26 5 5 0.0000000000000772072
Carica papaya supercontig_34 5 CH_cpa_83 4 6 0.00000000486984
Chenopodium quinoa C_Quinoa_Scaffold_1529 5 CH_cqu_1007 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_2939 5 CH_cqu_152 4 5 0.0000000000239348
Capsella rubella scaffold_1 5 CH_cru_82 7 35 0.0000000000000473926
Cucumis sativus L. chr7 5 CH_csa_68 5 5 0.0000000000000917943
Daucus carota DCARv2_Chr3 5 CH_dca_28 6 8 5.58468e-17
Davidia involucrata GWHABJS00000001 5 CH_din_664 2 2 0.000300075
Davidia involucrata GWHABJS00000013 5 CH_din_854 2 3 0.000900173
Durio zibethinus NW_019167993.1 5 CH_dzi_26 7 7 2.6803e-21
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_1 10 12 2.27864e-32
Eucalyptus grandis Chr11 5 CH_egr_241 6 7 1.85624e-16
Erythranthe guttata scaffold_8 5 CH_egut_171 4 4 0.000000000243245
Eutrema salsugineum scaffold_5 5 CH_esa_202 3 4 0.000000695797
Fragaria vesca Fvb6 5 CH_fve_85 5 6 0.0000000000000113824
Gossypium hirsutum A03 5 CH_ghi_206 5 5 0.000000000000647834
Gossypium hirsutum D02 5 CH_ghi_207 5 5 0.000000000000647834
Glycine max Gm06 5 CH_gma_34 9 13 2.28695e-22
Glycine max Gm13 5 CH_gma_39 8 9 5.84106e-21
Glycine max Gm12 5 CH_gma_56 7 9 4.55706e-17
Gossypium raimondii Chr05 5 CH_gra_115 5 5 0.000000000000270657
Helianthus annuus HanXRQChr06 5 CH_han_152 5 7 0.000000000000278111
Helianthus annuus HanXRQChr17 5 CH_han_99 6 9 1.50456e-16
Hydrangea macrophylla Hma1.2p1_0565F.1 5 CH_hma_429 2 2 0.000111086
Lupinus albus Lalb_Chr14 5 CH_lal_108 4 4 0.000000000434141
Lotus japonicus chr3 5 CH_lja_273 3 4 0.00000171786
Lactuca sativa Lsat_1_v8_lg_3 5 CH_lsa_15 11 17 4.84765e-33
Magnolia biondii Chr18 5 CH_mbi_206 5 11 0.000000000119111
Magnolia biondii Chr02 5 CH_mbi_5 12 14 4.67439e-37
Malus domestica Chr17 5 CH_mdo_130 5 6 0.000000000000119758
Malus domestica Chr09 5 CH_mdo_131 5 6 0.000000000000119758
Manihot esculenta Chromosome13 5 CH_mes_146 5 6 0.00000000000187862
Manihot esculenta Chromosome12 5 CH_mes_240 4 5 0.00000000466091
Manihot esculenta Chromosome15 5 CH_mes_383 3 3 0.00000254492
Medicago truncatula chr2 5 CH_mtr_6 17 24 3.26724e-51
Medicago truncatula chr2 5 CH_mtr_773 3 3 0.00000389956
Nelumbo nucifera chr1 5 CH_nnu_159 5 13 0.0000000194911
Nelumbo nucifera chr1 5 CH_nnu_178 5 15 0.0000000454205
Nelumbo nucifera chr1 5 CH_nnu_350 3 3 0.0000248499
Nelumbo nucifera chr1 5 CH_nnu_4 17 17 3.93017e-50
Nelumbo nucifera chr3 5 CH_nnu_415 3 4 0.0000993379
Nicotiana tabacum Nitab4.5_0000769 5 CH_nta_132 3 5 0.00000361094
Olea europaea chr4 5 CH_oeu_56 4 4 0.000000000031942
Oryza sativa ssp. japonica chr04 5 CH_osa_211 4 9 0.0000000116847
Punica granatum NC_045128.1 5 CH_pgr_227 3 3 0.000000168917
Prunus persica Pp03 5 CH_ppe_13 12 16 7.72011e-35
Pisum sativum chr5LG3 5 CH_psa_2 14 35 3.55428e-37
Papaver somniferum NC_039358.1 5 CH_pso_332 4 7 0.00000000218458
Papaver somniferum NC_039362.1 5 CH_pso_9 10 12 5.60294e-33
Populus trichocarpa Chr13 5 CH_ptr_177 5 6 0.0000000000596199
Populus trichocarpa Chr01 5 CH_ptr_558 3 4 0.0000732036
Populus trichocarpa Chr19 5 CH_ptr_8 17 18 7.89235e-50
Phaseolus vulgaris Chr11 5 CH_pvu_361 3 4 0.00000926082
Phaseolus vulgaris Chr05 5 CH_pvu_52 7 8 1.70119e-19
Quercus lobata 5 5 CH_qlo_1305 3 5 0.0000531391
Quercus lobata 8 5 CH_qlo_304 6 8 0.0000000000000125348
Quercus lobata 8 5 CH_qlo_63 10 11 7.17177e-29
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_46 9 14 9.95927e-28
Rhododendron simsii chr06 5 CH_rsi_103 6 6 5.289e-18
Salvia bowleyana GWHASIU00000005 5 CH_sbo_331 3 7 0.000000434654
Salix brachista GWHAAZH00000019 5 CH_sbr_26 9 10 2.43465e-23
Salix brachista GWHAAZH00000019 5 CH_sbr_41 8 10 1.7372e-19
Salix brachista GWHAAZH00000013 5 CH_sbr_484 3 4 0.0000780031
Simmondsia chinensis GWHAASQ00000021 5 CH_sci_28 6 6 4.65312e-17
Sechium edule LG04 5 CH_sed_194 3 3 0.000000641322
Sechium edule LG05 5 CH_sed_195 3 3 0.000000641322
Solanum lycopersicum SL4.0ch07 5 CH_sly_52 7 8 3.09194e-21
Solanum pennellii Spenn-ch07 5 CH_spe_38 6 7 2.30356e-18
Solanum tuberosum ST4.03ch07 5 CH_stu_13 11 13 5.1882e-34
Trochodendron aralioides group6 5 CH_tar_11 9 10 1.19823e-26
Trochodendron aralioides group0 5 CH_tar_85 5 6 0.00000000000175545
Theobroma cacao Chromosome_2 5 CH_tca_180 5 10 0.000000000108719
Theobroma cacao Chromosome_7 5 CH_tca_58 7 10 5.00401e-18
Trifolium pratense Tp57577_TGAC_v2_scaf_350 5 CH_tpr_29 6 7 3.28904e-17
Tripterygium wilfordii NC_052237.1 5 CH_twi_262 3 8 0.00000521945
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_183 3 3 0.0000000518115
Vitis vinifera chr12 5 CH_vvi_312 3 5 0.000000347102
Zea mays 2 5 CH_zma_169 3 3 0.0000000784342
Acer truncatum chr6 6 CH_acertr_138 4 5 0.00000000036786
Actinidia chinensis Lachesis_group19 6 CH_ach_18 5 5 0.00000000000000822966
Avicennia marina ScioBoG_17730_HRSCAF_17811 6 CH_ama_64 3 4 0.000000892017
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 6 CH_amhyb_29 5 7 0.000000000000166053
Aquilegia oxysepala CHR01 6 CH_aox_401 2 3 0.000240587
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 6 CH_arhy_184 5 6 0.00000000000000911021
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 6 CH_arhy_315 4 5 0.000000000084523
Amborella trichopoda AmTr_v1.0_scaffold00003 6 CH_atr_104 4 8 0.000000000105277
Brassica carinata ChrC08 6 CH_bca_209 5 11 0.000000000047539
Brassica carinata ChrB07 6 CH_bca_457 4 8 0.0000000306432
Brassica napus A09 6 CH_bna_765 3 5 0.00000687169
Brassica napus C06 6 CH_bna_999 3 10 0.0000576911
Brassica oleracea C6 6 CH_bol_530 3 9 0.0000384688
Brassica rapa A09 6 CH_bra_31 6 12 0.0000000000000151613
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_476 2 2 0.00049675
Camellia sinensis var. sinensis Chr5 6 CH_camsi_14 13 36 8.22099e-33
Camellia sinensis var. sinensis Chr7 6 CH_camsi_92 6 6 1.2379e-16
Cannabis sativa NC_044377.1 6 CH_cansat_27 6 7 1.92332e-19
Capsicum annuum PGAv.1.6.scaffold508 6 CH_can_52 8 9 1.8105e-21
Cicer arietinum L. Ca_LG1_v3 6 CH_car_12 5 7 0.000000000000728109
Corylus avellana 4 6 CH_cav_161 4 4 0.00000000135355
Corylus avellana 5 6 CH_cav_30 8 12 7.29048e-21
Coffea canephora chr5 6 CH_ccan_10 6 42 1.38884e-17
Citrus clementina scaffold_2 6 CH_ccl_31 9 11 1.14381e-25
Citrus clementina scaffold_1 6 CH_ccl_572 3 7 0.000100901
Carpinus fangiana Cfa06 6 CH_cfa_13 11 13 2.57997e-32
Carpinus fangiana Cfa08 6 CH_cfa_358 3 4 0.0000156532
Cardamine hirsuta Chr8 6 CH_chi_294 4 16 0.000000377774
Carya illinoinensis Chr03 6 CH_cil_11 12 13 9.77577e-37
Citrullus lanatus CG_Chr02 6 CH_cla_49 4 4 0.00000000026393
Cucumis melo chr01 6 CH_cme_28 7 8 1.83314e-20
Corchorus olitorius AWUE01014241.1 6 CH_col_12 6 7 3.35351e-16
Carica papaya supercontig_12 6 CH_cpa_26 5 5 0.0000000000000772072
Carica papaya supercontig_34 6 CH_cpa_83 4 6 0.00000000486984
Chenopodium quinoa C_Quinoa_Scaffold_1529 6 CH_cqu_1007 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_2939 6 CH_cqu_152 4 5 0.0000000000239348
Capsella rubella scaffold_1 6 CH_cru_82 7 35 0.0000000000000473926
Cucumis sativus L. chr7 6 CH_csa_68 5 5 0.0000000000000917943
Daucus carota DCARv2_Chr3 6 CH_dca_28 6 8 5.58468e-17
Davidia involucrata GWHABJS00000001 6 CH_din_664 2 2 0.000300075
Davidia involucrata GWHABJS00000013 6 CH_din_854 2 3 0.000900173
Durio zibethinus NW_019167993.1 6 CH_dzi_26 7 7 2.6803e-21
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_1 10 12 2.27864e-32
Eucalyptus grandis Chr11 6 CH_egr_241 6 7 1.85624e-16
Erythranthe guttata scaffold_8 6 CH_egut_171 4 4 0.000000000243245
Eutrema salsugineum scaffold_5 6 CH_esa_202 3 4 0.000000695797
Fragaria x ananassa Fvb6-1 6 CH_fan_288 4 10 0.0000000353118
Fragaria x ananassa Fvb6-2 6 CH_fan_434 3 3 0.000000909551
Fragaria x ananassa Fvb6-4 6 CH_fan_58 6 9 4.13705e-16
Fragaria x ananassa Fvb6-3 6 CH_fan_679 3 6 0.0000181829
Fragaria vesca Fvb6 6 CH_fve_85 5 6 0.0000000000000113824
Gossypium hirsutum A03 6 CH_ghi_206 5 5 0.000000000000647834
Gossypium hirsutum D02 6 CH_ghi_207 5 5 0.000000000000647834
Glycine max Gm06 6 CH_gma_34 9 13 2.28695e-22
Glycine max Gm13 6 CH_gma_39 8 9 5.84106e-21
Glycine max Gm12 6 CH_gma_56 7 9 4.55706e-17
Gossypium raimondii Chr05 6 CH_gra_115 5 5 0.000000000000270657
Helianthus annuus HanXRQChr06 6 CH_han_152 5 7 0.000000000000278111
Helianthus annuus HanXRQChr17 6 CH_han_99 6 9 1.50456e-16
Hydrangea macrophylla Hma1.2p1_0565F.1 6 CH_hma_429 2 2 0.000111086
Lupinus albus Lalb_Chr14 6 CH_lal_108 4 4 0.000000000434141
Lotus japonicus chr3 6 CH_lja_273 3 4 0.00000171786
Lactuca sativa Lsat_1_v8_lg_3 6 CH_lsa_15 11 17 4.84765e-33
Magnolia biondii Chr18 6 CH_mbi_206 5 11 0.000000000119111
Magnolia biondii Chr02 6 CH_mbi_5 12 14 4.67439e-37
Malus domestica Chr17 6 CH_mdo_130 5 6 0.000000000000119758
Malus domestica Chr09 6 CH_mdo_131 5 6 0.000000000000119758
Manihot esculenta Chromosome13 6 CH_mes_146 5 6 0.00000000000187862
Manihot esculenta Chromosome12 6 CH_mes_240 4 5 0.00000000466091
Manihot esculenta Chromosome15 6 CH_mes_383 3 3 0.00000254492
Medicago truncatula chr2 6 CH_mtr_6 17 24 3.26724e-51
Medicago truncatula chr2 6 CH_mtr_773 3 3 0.00000389956
Nelumbo nucifera chr1 6 CH_nnu_159 5 13 0.0000000194911
Nelumbo nucifera chr1 6 CH_nnu_178 5 15 0.0000000454205
Nelumbo nucifera chr1 6 CH_nnu_350 3 3 0.0000248499
Nelumbo nucifera chr1 6 CH_nnu_4 17 17 3.93017e-50
Nelumbo nucifera chr3 6 CH_nnu_415 3 4 0.0000993379
Nicotiana tabacum Nitab4.5_0000769 6 CH_nta_132 3 5 0.00000361094
Olea europaea chr4 6 CH_oeu_56 4 4 0.000000000031942
Oryza sativa ssp. japonica chr04 6 CH_osa_211 4 9 0.0000000116847
Punica granatum NC_045128.1 6 CH_pgr_227 3 3 0.000000168917
Prunus persica Pp03 6 CH_ppe_13 12 16 7.72011e-35
Pisum sativum chr5LG3 6 CH_psa_2 14 35 3.55428e-37
Papaver somniferum NC_039358.1 6 CH_pso_332 4 7 0.00000000218458
Papaver somniferum NC_039362.1 6 CH_pso_9 10 12 5.60294e-33
Populus trichocarpa Chr13 6 CH_ptr_177 5 6 0.0000000000596199
Populus trichocarpa Chr01 6 CH_ptr_558 3 4 0.0000732036
Populus trichocarpa Chr19 6 CH_ptr_8 17 18 7.89235e-50
Phaseolus vulgaris Chr11 6 CH_pvu_361 3 4 0.00000926082
Phaseolus vulgaris Chr05 6 CH_pvu_52 7 8 1.70119e-19
Quercus lobata 5 6 CH_qlo_1305 3 5 0.0000531391
Quercus lobata 8 6 CH_qlo_304 6 8 0.0000000000000125348
Quercus lobata 8 6 CH_qlo_63 10 11 7.17177e-29
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_46 9 14 9.95927e-28
Rhododendron simsii chr06 6 CH_rsi_103 6 6 5.289e-18
Salvia bowleyana GWHASIU00000005 6 CH_sbo_331 3 7 0.000000434654
Salix brachista GWHAAZH00000019 6 CH_sbr_26 9 10 2.43465e-23
Salix brachista GWHAAZH00000019 6 CH_sbr_41 8 10 1.7372e-19
Salix brachista GWHAAZH00000013 6 CH_sbr_484 3 4 0.0000780031
Simmondsia chinensis GWHAASQ00000021 6 CH_sci_28 6 6 4.65312e-17
Sechium edule LG04 6 CH_sed_194 3 3 0.000000641322
Sechium edule LG05 6 CH_sed_195 3 3 0.000000641322
Solanum lycopersicum SL4.0ch07 6 CH_sly_52 7 8 3.09194e-21
Solanum pennellii Spenn-ch07 6 CH_spe_38 6 7 2.30356e-18
Solanum tuberosum ST4.03ch07 6 CH_stu_13 11 13 5.1882e-34
Trochodendron aralioides group6 6 CH_tar_11 9 10 1.19823e-26
Trochodendron aralioides group0 6 CH_tar_85 5 6 0.00000000000175545
Theobroma cacao Chromosome_2 6 CH_tca_180 5 10 0.000000000108719
Theobroma cacao Chromosome_7 6 CH_tca_58 7 10 5.00401e-18
Trifolium pratense Tp57577_TGAC_v2_scaf_350 6 CH_tpr_29 6 7 3.28904e-17
Tripterygium wilfordii NC_052237.1 6 CH_twi_262 3 8 0.00000521945
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_183 3 3 0.0000000518115
Vitis vinifera chr12 6 CH_vvi_312 3 5 0.000000347102
Zea mays 2 6 CH_zma_169 3 3 0.0000000784342

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001