Functional clusters

Information

  • Type InterPro
  • Description Protein of unknown function DUF3754

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_958 2 3 0.000634436
Actinidia chinensis Lachesis_group3 5 CH_ach_459 2 2 0.000325928
Beta vulgaris Chr6_EL10_PGA_scaffold0 5 CH_bvu_432 2 2 0.000248375
Camellia sinensis var. sinensis Chr2 5 CH_camsi_349 4 11 0.00000000333925
Cannabis sativa NC_044379.1 5 CH_cansat_469 2 2 0.000196993
Citrullus lanatus CG_Chr05 5 CH_cla_295 2 2 0.000266134
Carica papaya supercontig_70 5 CH_cpa_499 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_3489 5 CH_cqu_939 2 2 0.000473821
Durio zibethinus NW_019167960.1 5 CH_dzi_542 2 2 0.000463489
Eucalyptus grandis Chr09 5 CH_egr_676 3 3 0.0000000513834
Fragaria vesca Fvb6 5 CH_fve_306 3 3 0.0000000520576
Magnolia biondii Chr11 5 CH_mbi_1036 2 2 0.000291397
Manihot esculenta Chromosome04 5 CH_mes_687 2 2 0.000610631
Manihot esculenta Chromosome11 5 CH_mes_688 2 2 0.000610631
Punica granatum NC_045128.1 5 CH_pgr_563 2 2 0.000450214
Physcomitrium patens Chr04 5 CH_ppa_318 2 2 0.000367636
Populus trichocarpa Chr14 5 CH_ptr_690 2 2 0.000346801
Quercus lobata CM012294 5 CH_qlo_1467 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1244 2 2 0.000239192
Simmondsia chinensis GWHAASQ00000016 5 CH_sci_127 3 3 0.000000108744
Sechium edule LG06 5 CH_sed_465 2 2 0.000428052
Theobroma cacao Chromosome_4 5 CH_tca_625 2 2 0.000219716
Tripterygium wilfordii NC_052254.1 5 CH_twi_410 2 2 0.000167252
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_804 2 2 0.000929238
Vitis vinifera chr14 5 CH_vvi_739 2 3 0.000684523
Acer truncatum chr6 6 CH_acertr_958 2 3 0.000634436
Actinidia chinensis Lachesis_group3 6 CH_ach_459 2 2 0.000325928
Beta vulgaris Chr6_EL10_PGA_scaffold0 6 CH_bvu_432 2 2 0.000248375
Camellia sinensis var. sinensis Chr2 6 CH_camsi_349 4 11 0.00000000333925
Cannabis sativa NC_044379.1 6 CH_cansat_469 2 2 0.000196993
Citrullus lanatus CG_Chr05 6 CH_cla_295 2 2 0.000266134
Carica papaya supercontig_70 6 CH_cpa_499 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_3489 6 CH_cqu_939 2 2 0.000473821
Durio zibethinus NW_019167960.1 6 CH_dzi_542 2 2 0.000463489
Eucalyptus grandis Chr09 6 CH_egr_676 3 3 0.0000000513834
Fragaria vesca Fvb6 6 CH_fve_306 3 3 0.0000000520576
Magnolia biondii Chr11 6 CH_mbi_1036 2 2 0.000291397
Manihot esculenta Chromosome04 6 CH_mes_687 2 2 0.000610631
Manihot esculenta Chromosome11 6 CH_mes_688 2 2 0.000610631
Punica granatum NC_045128.1 6 CH_pgr_563 2 2 0.000450214
Physcomitrium patens Chr04 6 CH_ppa_318 2 2 0.000367636
Populus trichocarpa Chr14 6 CH_ptr_690 2 2 0.000346801
Quercus lobata CM012294 6 CH_qlo_1467 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1244 2 2 0.000239192
Simmondsia chinensis GWHAASQ00000016 6 CH_sci_127 3 3 0.000000108744
Sechium edule LG06 6 CH_sed_465 2 2 0.000428052
Theobroma cacao Chromosome_4 6 CH_tca_625 2 2 0.000219716
Tripterygium wilfordii NC_052254.1 6 CH_twi_410 2 2 0.000167252
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_804 2 2 0.000929238
Vitis vinifera chr14 6 CH_vvi_739 2 3 0.000684523

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001