Functional clusters

Information

  • Type InterPro
  • Description Transcription factor Spt20

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 5 CH_acertr_603 2 2 0.000070497
Actinidia chinensis Lachesis_group27 5 CH_ach_366 2 2 0.000162964
Brassica carinata ChrC03 5 CH_bca_1950 2 3 0.000641272
Brassica carinata ChrB03 5 CH_bca_1951 2 3 0.000641272
Carica papaya supercontig_25 5 CH_cpa_348 2 2 0.0000950661
Lonicera japonica GWHAAZE00000006 5 CH_lonja_928 2 2 0.000179662
Medicago truncatula chr8 5 CH_mtr_1183 2 2 0.000246518
Sequoiadendron giganteum chr4 5 CH_sgi_905 3 4 0.000000014239
Sapria himalayana scaffold51_3900769 5 CH_shi_107 3 4 0.0000000196176
Trochodendron aralioides group3 5 CH_tar_680 2 2 0.00018011
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_612 2 2 0.000278772
Acer truncatum chr11 6 CH_acertr_603 2 2 0.000070497
Actinidia chinensis Lachesis_group27 6 CH_ach_366 2 2 0.000162964
Brassica carinata ChrC03 6 CH_bca_1950 2 3 0.000641272
Brassica carinata ChrB03 6 CH_bca_1951 2 3 0.000641272
Carica papaya supercontig_25 6 CH_cpa_348 2 2 0.0000950661
Lonicera japonica GWHAAZE00000006 6 CH_lonja_928 2 2 0.000179662
Medicago truncatula chr8 6 CH_mtr_1183 2 2 0.000246518
Sequoiadendron giganteum chr4 6 CH_sgi_905 3 4 0.000000014239
Sapria himalayana scaffold51_3900769 6 CH_shi_107 3 4 0.0000000196176
Trochodendron aralioides group3 6 CH_tar_680 2 2 0.00018011
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_612 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001