Functional clusters
Information
- Type InterPro
- Description Uncharacterised domain Wax2, C-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr5 | 5 | CH_acertr_69 | 6 | 25 | 0.000000000000193988 |
| Actinidia chinensis | Lachesis_group0 | 5 | CH_ach_526 | 2 | 2 | 0.000543213 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_473 | 2 | 2 | 0.000171895 |
| Brassica napus | A03 | 5 | CH_bna_646 | 3 | 4 | 0.0000020029 |
| Brassica rapa | A03 | 5 | CH_bra_613 | 2 | 2 | 0.000901558 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 5 | CH_bvu_157 | 3 | 3 | 0.0000000411285 |
| Cannabis sativa | NC_044370.1 | 5 | CH_cansat_468 | 2 | 2 | 0.000196993 |
| Capsicum annuum | PGAv.1.6.scaffold756 | 5 | CH_can_394 | 3 | 3 | 0.00000225218 |
| Corylus avellana | 1 | 5 | CH_cav_305 | 3 | 5 | 0.00000176309 |
| Citrus clementina | scaffold_3 | 5 | CH_ccl_723 | 2 | 2 | 0.000492187 |
| Carpinus fangiana | scaffold9 | 5 | CH_cfa_247 | 3 | 3 | 0.000000301137 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_717 | 2 | 2 | 0.000414723 |
| Carya illinoinensis | Chr13 | 5 | CH_cil_865 | 2 | 2 | 0.000929742 |
| Citrullus lanatus | CG_Chr05 | 5 | CH_cla_388 | 2 | 2 | 0.000887115 |
| Corchorus olitorius | AWUE01016378.1 | 5 | CH_col_80 | 3 | 4 | 0.0000020475 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1352 | 5 | CH_cqu_366 | 3 | 3 | 0.000000282885 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1412 | 5 | CH_cqu_367 | 3 | 3 | 0.000000282885 |
| Capsella rubella | scaffold_1 | 5 | CH_cru_653 | 2 | 2 | 0.000731154 |
| Cucumis sativus L. | chr3 | 5 | CH_csa_183 | 3 | 3 | 0.000000104528 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_347 | 3 | 5 | 0.0000134168 |
| Davidia involucrata | GWHABJS00000020 | 5 | CH_din_273 | 3 | 3 | 0.000000315165 |
| Durio zibethinus | NW_019168048.1 | 5 | CH_dzi_253 | 3 | 4 | 0.00000108259 |
| Eucalyptus grandis | Chr04 | 5 | CH_egr_297 | 7 | 43 | 0.00000000000000925096 |
| Eutrema salsugineum | scaffold_5 | 5 | CH_esa_462 | 2 | 2 | 0.000456899 |
| Fragaria vesca | Fvb7 | 5 | CH_fve_374 | 3 | 5 | 0.0000005205 |
| Gossypium hirsutum | A06 | 5 | CH_ghi_291 | 4 | 4 | 0.000000000174771 |
| Gossypium hirsutum | D06 | 5 | CH_ghi_732 | 3 | 6 | 0.0000174453 |
| Glycine max | Gm03 | 5 | CH_gma_327 | 3 | 3 | 0.0000000756348 |
| Gossypium raimondii | Chr10 | 5 | CH_gra_275 | 3 | 3 | 0.000000362147 |
| Lotus japonicus | chr3 | 5 | CH_lja_608 | 2 | 2 | 0.000715077 |
| Lonicera japonica | GWHAAZE00000145 | 5 | CH_lonja_613 | 3 | 5 | 0.00000645348 |
| Malus domestica | Chr07 | 5 | CH_mdo_477 | 4 | 31 | 0.000000179858 |
| Manihot esculenta | Chromosome05 | 5 | CH_mes_163 | 4 | 4 | 0.0000000000102468 |
| Medicago truncatula | chr7 | 5 | CH_mtr_665 | 3 | 4 | 0.000000850717 |
| Medicago truncatula | chr4 | 5 | CH_mtr_963 | 3 | 12 | 0.0000467471 |
| Petunia axillaris | Peaxi162Scf00103 | 5 | CH_pax_278 | 3 | 3 | 0.00000212359 |
| Punica granatum | NC_045131.1 | 5 | CH_pgr_209 | 3 | 3 | 0.0000000844584 |
| Prunus persica | Pp02 | 5 | CH_ppe_152 | 5 | 11 | 0.000000000000643638 |
| Populus trichocarpa | Chr14 | 5 | CH_ptr_410 | 3 | 6 | 0.00000200401 |
| Phaseolus vulgaris | Chr10 | 5 | CH_pvu_545 | 2 | 2 | 0.000220418 |
| Quercus lobata | 4 | 5 | CH_qlo_380 | 5 | 10 | 0.000000000000751782 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_111 | 8 | 54 | 4.71381e-19 |
| Rhododendron simsii | chr07 | 5 | CH_rsi_360 | 3 | 3 | 0.0000000249861 |
| Salvia bowleyana | GWHASIU00000003 | 5 | CH_sbo_151 | 5 | 11 | 0.00000000000187001 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_621 | 5 | 16 | 0.0000000000464368 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_350 | 3 | 3 | 0.000000434082 |
| Solanum pennellii | Spenn-ch01 | 5 | CH_spe_87 | 5 | 7 | 0.000000000000793214 |
| Selenicereus undatus | Scaffold_33676 | 5 | CH_sun_391 | 2 | 2 | 0.000726639 |
| Theobroma cacao | Chromosome_2 | 5 | CH_tca_139 | 5 | 9 | 0.00000000000342438 |
| Tripterygium wilfordii | NC_052248.1 | 5 | CH_twi_27 | 6 | 7 | 2.37562e-18 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_19 | 7 | 9 | 6.57371e-20 |
| Vigna mungo | CM024078.1 | 5 | CH_vmu_186 | 3 | 5 | 0.000000250479 |
| Vanilla planifolia | CM028161.1 | 5 | CH_vpl_717 | 2 | 2 | 0.00073888 |
| Vitis vinifera | chr15 | 5 | CH_vvi_87 | 8 | 49 | 3.43577e-16 |
| Acer truncatum | chr5 | 6 | CH_acertr_69 | 6 | 25 | 0.000000000000193988 |
| Actinidia chinensis | Lachesis_group0 | 6 | CH_ach_526 | 2 | 2 | 0.000543213 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_473 | 2 | 2 | 0.000171895 |
| Brassica napus | A03 | 6 | CH_bna_646 | 3 | 4 | 0.0000020029 |
| Brassica rapa | A03 | 6 | CH_bra_613 | 2 | 2 | 0.000901558 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 6 | CH_bvu_157 | 3 | 3 | 0.0000000411285 |
| Cannabis sativa | NC_044370.1 | 6 | CH_cansat_468 | 2 | 2 | 0.000196993 |
| Capsicum annuum | PGAv.1.6.scaffold756 | 6 | CH_can_394 | 3 | 3 | 0.00000225218 |
| Corylus avellana | 1 | 6 | CH_cav_305 | 3 | 5 | 0.00000176309 |
| Citrus clementina | scaffold_3 | 6 | CH_ccl_723 | 2 | 2 | 0.000492187 |
| Carpinus fangiana | scaffold9 | 6 | CH_cfa_247 | 3 | 3 | 0.000000301137 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_717 | 2 | 2 | 0.000414723 |
| Carya illinoinensis | Chr13 | 6 | CH_cil_865 | 2 | 2 | 0.000929742 |
| Citrullus lanatus | CG_Chr05 | 6 | CH_cla_388 | 2 | 2 | 0.000887115 |
| Cucumis melo | chr06 | 6 | CH_cme_155 | 3 | 3 | 0.0000000667579 |
| Corchorus olitorius | AWUE01016378.1 | 6 | CH_col_80 | 3 | 4 | 0.0000020475 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1352 | 6 | CH_cqu_366 | 3 | 3 | 0.000000282885 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1412 | 6 | CH_cqu_367 | 3 | 3 | 0.000000282885 |
| Capsella rubella | scaffold_1 | 6 | CH_cru_653 | 2 | 2 | 0.000731154 |
| Cucumis sativus L. | chr3 | 6 | CH_csa_183 | 3 | 3 | 0.000000104528 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_347 | 3 | 5 | 0.0000134168 |
| Davidia involucrata | GWHABJS00000020 | 6 | CH_din_273 | 3 | 3 | 0.000000315165 |
| Durio zibethinus | NW_019168048.1 | 6 | CH_dzi_253 | 3 | 4 | 0.00000108259 |
| Eucalyptus grandis | Chr04 | 6 | CH_egr_297 | 7 | 43 | 0.00000000000000925096 |
| Eutrema salsugineum | scaffold_5 | 6 | CH_esa_462 | 2 | 2 | 0.000456899 |
| Fragaria x ananassa | Fvb7-3 | 6 | CH_fan_311 | 4 | 13 | 0.0000000812354 |
| Fragaria x ananassa | Fvb7-1 | 6 | CH_fan_652 | 3 | 6 | 0.0000136557 |
| Fragaria vesca | Fvb7 | 6 | CH_fve_374 | 3 | 5 | 0.0000005205 |
| Gossypium hirsutum | A06 | 6 | CH_ghi_291 | 4 | 4 | 0.000000000174771 |
| Gossypium hirsutum | D06 | 6 | CH_ghi_732 | 3 | 6 | 0.0000174453 |
| Glycine max | Gm03 | 6 | CH_gma_327 | 3 | 3 | 0.0000000756348 |
| Gossypium raimondii | Chr10 | 6 | CH_gra_275 | 3 | 3 | 0.000000362147 |
| Lotus japonicus | chr3 | 6 | CH_lja_608 | 2 | 2 | 0.000715077 |
| Lonicera japonica | GWHAAZE00000145 | 6 | CH_lonja_613 | 3 | 5 | 0.00000645348 |
| Malus domestica | Chr07 | 6 | CH_mdo_477 | 4 | 31 | 0.000000179858 |
| Manihot esculenta | Chromosome05 | 6 | CH_mes_163 | 4 | 4 | 0.0000000000102468 |
| Medicago truncatula | chr7 | 6 | CH_mtr_665 | 3 | 4 | 0.000000850717 |
| Medicago truncatula | chr4 | 6 | CH_mtr_963 | 3 | 12 | 0.0000467471 |
| Petunia axillaris | Peaxi162Scf00103 | 6 | CH_pax_278 | 3 | 3 | 0.00000212359 |
| Punica granatum | NC_045131.1 | 6 | CH_pgr_209 | 3 | 3 | 0.0000000844584 |
| Prunus persica | Pp02 | 6 | CH_ppe_152 | 5 | 11 | 0.000000000000643638 |
| Populus trichocarpa | Chr14 | 6 | CH_ptr_410 | 3 | 6 | 0.00000200401 |
| Phaseolus vulgaris | Chr10 | 6 | CH_pvu_545 | 2 | 2 | 0.000220418 |
| Quercus lobata | 4 | 6 | CH_qlo_380 | 5 | 10 | 0.000000000000751782 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_111 | 8 | 54 | 4.71381e-19 |
| Rhododendron simsii | chr07 | 6 | CH_rsi_360 | 3 | 3 | 0.0000000249861 |
| Salvia bowleyana | GWHASIU00000003 | 6 | CH_sbo_151 | 5 | 11 | 0.00000000000187001 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_621 | 5 | 16 | 0.0000000000464368 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_350 | 3 | 3 | 0.000000434082 |
| Solanum pennellii | Spenn-ch01 | 6 | CH_spe_87 | 5 | 7 | 0.000000000000793214 |
| Selenicereus undatus | Scaffold_33676 | 6 | CH_sun_391 | 2 | 2 | 0.000726639 |
| Theobroma cacao | Chromosome_2 | 6 | CH_tca_139 | 5 | 9 | 0.00000000000342438 |
| Tripterygium wilfordii | NC_052248.1 | 6 | CH_twi_27 | 6 | 7 | 2.37562e-18 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_19 | 7 | 9 | 6.57371e-20 |
| Vigna mungo | CM024078.1 | 6 | CH_vmu_186 | 3 | 5 | 0.000000250479 |
| Vanilla planifolia | CM028161.1 | 6 | CH_vpl_717 | 2 | 2 | 0.00073888 |
| Vitis vinifera | chr15 | 6 | CH_vvi_87 | 8 | 49 | 3.43577e-16 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |